Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618705.1_202016-
04-12] 1,300 sequences; 52,962,735 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq648 493 2e-137
>seq648
Length=99951
Score = 493 bits (546), Expect = 2e-137
Identities = 287/295 (97%), Gaps = 1/295 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| ||||||||||| | ||| ||||||||||||||||||||||||||||||||
Sbjct 409 TACTAAGCTCAATTACCATTGCGACGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 467
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 468 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 527
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 528 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 587
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 588 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 647
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 648 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 702
Score = 185 bits (204), Expect = 1e-44
Identities = 217/292 (74%), Gaps = 1/292 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||| |||| | | | ||| || |||| |||||||||||||| ||| |
Sbjct 8366 TACTAAGCTTAATTACTATTGCGACAA-GGTTATTAGTAAGGTAAAACTAACCTATCTTA 8424
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||| ||||||||| |||| | ||||| ||||||| || ||||||| ||||||||| |
Sbjct 8425 CGACAGTCTAAACCTAGCTTAGGTTCCTCATTAGTGAGTAAACAATCTAACGCTTACTAA 8484
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||| |||| ||| || || | || ||| || |||||| || | ||||
Sbjct 8485 ATTCTGCTTTAGTATAATAAAAAACGCTAATATTAAAGAATTAAAAAGTAATATTACTAT 8544
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||| ||| | ||| ||||||| || | ||||| ||| | | |||| ||||||
Sbjct 8545 AAACGCTTAGCTATTATTAGCTAGTTATCTCTATAGTAACCTTTTTAGTACCTTTAGCCT 8604
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
|||||| | || |||| || ||| || | ||||| || |||| ||||
Sbjct 8605 TAAATTTTAAAAGATCAAAGAATTAATAAGCTATACTTTTATAGTTTATATT 8656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854388892800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |