Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618705.1_202016-
04-12] 1,300 sequences; 52,962,735 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq319 356 2e-93
seq58 134 1e-26
>seq319
Length=296375
Score = 356 bits (394), Expect = 2e-93
Identities = 1143/1745 (66%), Gaps = 60/1745 (3%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| |||||||| || | | |||||| |||| || | || ||||||||||| |||
Sbjct 228579 TCGACGGTGAACTGAATGGGAGCAGCAGCAGCCTGCGTGCGCAGGTAGTACATGCCCGTC 228520
Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195
|| ||||| ||| ||| | ||||||||| | || | || |||| | |||| |
Sbjct 228519 TTCAGGCCGAGCTT-CCAGCCGGCGAAATGCAT-GCTGGTTATCTTGCCCATGGTCGGGT 228462
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| || || || || | |||||| ||| |||||| | |||||| || |||||||
Sbjct 228461 CCTTCATGTGAATGTTGAGCGACTGCGACTGGTCGATGAAGGCACCACGGTCGGCAGCCA 228402
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314
| | | | | ||| ||| |||||||| || |||||||||||| | | | ||||||
Sbjct 228401 TCTGCACAACAGTACGCTGCGAGATCTCCCAAACAGTCTTGTACAGG-GCCTTGACCTCA 228343
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374
| ||||| | |||| ||||| ||||| ||||| ||||| || |||
Sbjct 228342 GTAGGAATGTTGGGGATGTTCTGGATGGAACCGTTCTCGGCAATGATGCGGTTCTTCATG 228283
Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTT----GAACCAAGTGACGATTGATGAC 65430
| || ||||||| ||||| |||| |||| | || ||||| | |||| ||
Sbjct 228282 GCATCGGACCACAGACCCATGTCGACGAGATCCTTCAAGAGCCAAGGG----TTGACAAC 228227
Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490
|||||||| || | || |||||||| ||||||||||| ||| ||| |||||| |
Sbjct 228226 CTGGAACTCACCAGCAAGAACACGACGCTGGTAGATGTTGGAGGTGTAGGGCTCAAAGCA 228167
Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550
|| ||||||| | || || | || ||||| |||||||| ||||| | | ||
Sbjct 228166 CTCGTTGTTGCCCAAGATCTGCGAGGTGCTGGCAGTCGGCATGGGCGCGACGAGAAGAGA 228107
Query 65551 GTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGGT 65608
||| || | |||| | | ||| | | ||| | ||||||| ||| | || |
Sbjct 228106 GTTGCGGACACCGTGCTGCTTAATCTGCTCCTTCAAAGCATCCCAGTCCCAGAGATCCG- 228048
Query 65609 TTATCG-TCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGA 65667
| | | ||||| | ||||| || | || ||| | || | | || ||
Sbjct 228047 --AGGGCTTGACATTC------CACATGTCATACTGGAGGATGCCCTGAGAAACAGGGGA 227996
Query 65668 ACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGC--TGGTCTCGAG 65724
||| | | | | ||| |||||||||||||| || || || | |||| |||
Sbjct 227995 ACCCTCGTACGTCTGGTAGGGGCCCTCCTCCTTGGCCAGCTGCACCGACATGGT---GAG 227939
Query 65725 TGCGGCAAAATAAATGGTCTCGAAAATGCGTCGA-TTAAGTTCACGTGCCTCATCGCTCT 65783
|| || || ||||||||||| || | || || || || || ||||| ||
Sbjct 227938 GGCAGCGTGGTAGATGGTCTCGAAGAT-CTTCTTGTTGAGGTCGCGAGCCTCGGGAGACT 227880
Query 65784 CGTACGGCATACCCAT---CAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840
|| | ||||||| | ||||| | | || || ||||| || || || | |||||
Sbjct 227879 CGAAGGGCATACGGAGAGCCAGGA---AGGCATCAGCAAGACCCTGGACACCGAGACCGA 227823
Query 65841 TGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGA 65900
|||| || || |||| ||| | ||||| | |||||||||| |||| ||||
Sbjct 227822 TGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGAACAGGGTAGTGGTTGACGTCGA 227763
Query 65901 TAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCA 65959
| || | |||| ||||| || || || || ||| | || | ||| ||
Sbjct 227762 TGATTCTGTTCAGGTTGCGGACAACGACCTGGGTGACCTCGTGGAGCTTCTG-GAAGTCG 227704
Query 65960 AAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCG 66019
| ||| || || | || ||||| |||| ||||| || || ||
Sbjct 227703 TA--------GAC--TCCCTCGTTGTAGTCA--ACAAAGGTGGGCAGGGCGAGCGAGGCC 227656
Query 66020 AGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTA 66079
|||||||||||||| | ||| ||||| ||| ||||||| ||| || ||||| || ||
Sbjct 227655 AGGTTGCAGACAGCGACCTCATCAGGCGCGCAGTACTCGATAATCTCCGTGCAGAGGTTG 227596
Query 66080 CTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139
|| ||| || ||||| | |||| || || |||||||| ||| |||||||||||
Sbjct 227595 GAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCATCCTTGTAG 227536
Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGT 66199
| |||| | || | || ||||| |||| ||| | |||||| | ||| || |
Sbjct 227535 AGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCAGAGCTTCTGA 227476
Query 66200 GCCTTCACCGTACGTACCGCCCTA-CCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAA 66258
||||||| || | | | |||| || | | ||||| | ||||| | | || ||
Sbjct 227475 GCCTTCATGGT-CTTGCGACCCTTGCCCATCTGCTCGTACTTCTCGTACAAGGCCTCAAA 227417
Query 66259 GGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATC 66318
|| || | |||| ||| | || || | || || ||||| || | ||| ||
Sbjct 227416 CTCCTCGCCGTAGCAGTCGGCCAGGCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGTC 227357
Query 66319 ACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATC 66378
|||| || || || | ||| || || || || |||||||||||| ||| || ||
Sbjct 227356 CCCATTCTTCTCCACCCTCTTCATGAAGAGGTCGGGAATCCAGAGGGCGAGGAAAAGGTC 227297
Query 66379 GCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTC 66438
|| || || |||||| ||||||| || |||||||| || | ||| || |||| ||
Sbjct 227296 ACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAAATCCAAGAAGTCGAAGACATC 227237
Query 66439 GGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTC 66498
||| ||||| || || ||||| |||||||| | || || ||| |||||| |||||
Sbjct 227236 GGCGTGCCAAGGCTCAAGGTAAATGGCGAAAGCACCGGGGCGCTTGTTGCCACCCTGGTC 227177
Query 66499 GACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCC 66558
|||||||||||| |||||||||||||| | ||| || |||| ||||| || | ||
Sbjct 227176 GACGTAGCGAGCAGTGTTGTTGAAGACACGGAGCATAGGGACGACACCGTTGGAGGTACC 227117
Query 66559 ATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACC 66618
|| |||||| | || || || || || || ||| || || |||||||| ||
Sbjct 227116 GTTCGTGCCGGCAATATATGAGCCGGTGGCGCGGATGCGGTGGACGTTGAGACCAATGCC 227057
Query 66619 ACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCAATG 66676
||||||| |||| ||||| || ||| || | |||| | || || |||||
Sbjct 227056 ACCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGGGTGTC--ATAGATACCCTCAATA 226999
Query 66677 GAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCC 66736
||||| |||| ||| | |||| |||| || || |||| | || || ||||
Sbjct 226998 GAGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGACAGCTGGGCCTGAGGGGTACCGGCG 226939
Query 66737 GAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCG 66796
|||||| ||||| | ||||| || ||| | | || ||||| ||||| || |||
Sbjct 226938 TTGAAGAGTGTGGGAGAGGCGTGAGTGAAGAACTTGCTCGACATCAGGTTGTAGGTTTCG 226879
Query 66797 ATGAC 66801
|||||
Sbjct 226878 ATGAC 226874
>seq58
Length=215898
Score = 134 bits (148), Expect = 1e-26
Identities = 289/425 (68%), Gaps = 9/425 (2%)
Strand=Plus/Plus
Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569
|| |||||| | || ||||| || | || ||| | ||||| ||| | ||||| |||||
Sbjct 121216 GTTGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGT 121275
Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629
||||||||||||||||||||| ||| ||| |||| || || || ||||| | ||
Sbjct 121276 CTTATGCCCGGTCTGACCTTCTCCAACGAGCTGATCTCTCGTGATGAGGGTCTTCACACC 121335
Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCCGTCGGAGGAGCGTGT 61688
|| || || | || | || || | || ||| || || || || |
Sbjct 121336 GACTTCGCCTGCCTCCTCT----ACTCTCACCTCAAGAACCGCCCCAGCAAGCAGGTCAT 121391
Query 61689 GGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGC 61747
| || || | ||| || || || | || || ||||| || ||||| || ||| |||
Sbjct 121392 TGAGGACATCAT-CGTCGATGCTGTCAAGATTGAGCAGGAGTTCCTGACCGAGGCTCTGC 121450
Query 61748 CCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCG 61807
| | | || |||||||||| | || ||| |||||| ||||| ||||||||||
Sbjct 121451 CTTGCGCTCTGCTCGGCATGAACTCCAACCTGATGAAGCAGTACATTGAGTTTGTTGCCG 121510
Query 61808 ACCGTCTGTTGGTCGAT-TTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGAT 61866
|||| || ||||| | | | || |||| || |||| || | ||||| |||||
Sbjct 121511 ACCGCCTCTTGGTTGCTCTCGGCAATGACAAGG-TCTACAAGTCTTCCAACCCCTTTGAC 121569
Query 61867 TTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGAC 61926
|||||||| | || || |||| |||||||| || || || ||||| ||||| | ||||
Sbjct 121570 TTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTTGAGAAGCGTGTTGCCGAC 121629
Query 61927 TATCA 61931
|| ||
Sbjct 121630 TACCA 121634
Score = 127 bits (140), Expect = 2e-24
Identities = 209/297 (70%), Gaps = 7/297 (2%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| | || ||
Sbjct 120730 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCTTTCTGGACCGCCGAGGAGATTGACCTG 120789
Query 61147 TCCAAAGACATGAATGACTGGGAGCGT----TTATCGAGCGGTGAACAACATTTCATTAA 61202
||||| || | | |||||| | | | | |||| | ||| | | |||||
Sbjct 120790 TCCAAGGATCTCCACGACTGGAACAATAAGATCAACGAG-GATGAGAAGTACTTCATCTC 120848
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| | | || ||||| |||||||| ||||| || ||||||||||| || | || ||
Sbjct 120849 GCACATCCTCGCCTTCTTCGCCGCTTCTGACGGCATTGTCAATGAGAACTTGGTCGAGCG 120908
Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| ||| ||||| || || | ||||| ||||| ||||| |||||||| || |
Sbjct 120909 CTTCAGCG-GCGAGGTCCAGGTCCCCGAGGCCCGTTGCTTCTATGGCTTCCAAATCATGA 120967
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
||||||| ||||||| |||| ||| | |||||||| || ||||||| |||||
Sbjct 120968 TGGAGAACATCCACTCCGAGACCTACTCGCTGCTCATCGACACCTACATCAAGGAGC 121024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397561701032000
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