Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618705.1_202016- 04-12] 1,300 sequences; 52,962,735 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq118 91.5 6e-13 >seq118 Length=94400 Score = 91.5 bits (100), Expect = 6e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||||| | | || ||||||||||| || ||| ||||| | Sbjct 65337 CAATGGTCATACGAGACGGAATGGCGTGGGGATTGATGATGATATCCGGCGTGATGCCCT 65278 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 | ||||| |||||||| ||||| | | | | | |||||| || ||||| || | | Sbjct 65277 CGGCGGTGAAGGGCATGTCTTCCTGTCGGTAGGTAACACCAATAGTACCCTTCTGACCGT 65218 Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569 || || || || ||||| ||||| Sbjct 65217 GACGCGACGCGAATTTGTCACCAAT 65193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884855004860900