Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618715.1_202016- 04-12] 791 sequences; 52,719,552 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq222 172 3e-41 seq766 82.4 4e-14 >seq222 Length=6087 Score = 172 bits (190), Expect = 3e-41 Identities = 109/117 (93%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| || Sbjct 2395 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAA-ATAACATCGTCC 2337 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2336 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 2280 >seq766 Length=86199 Score = 82.4 bits (90), Expect = 4e-14 Identities = 83/107 (78%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 11 ACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGT 70 ||||| |||||| |||||||| | ||| |||| ||||||| | | ||| ||||| Sbjct 81223 ACTTTAATTTCTTATAAGGTGCTAAATAAGTTAAAAA-ATAACATTGTCTAATCTCTAGT 81165 Query 71 CGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | |||||||| ||||||||||||||||||||| || ||||| || Sbjct 81164 TAGTATAGTTTATAGTTAAGACTACGACGGTATCTAATTGTCTTTGA 81118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278397935490