Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618715.1_202016-
04-12] 791 sequences; 52,719,552 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq222 482 4e-134
seq766 269 5e-70
>seq222
Length=6087
Score = 482 bits (534), Expect = 4e-134
Identities = 296/314 (94%), Gaps = 1/314 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||
Sbjct 1966 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCGCATGCCCTTCACTGGGTGTGCCGGGGA 2025
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||||||||||||||||||| || | |||||||| |||||||||||||
Sbjct 2026 AACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACAT 2085
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2086 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 2145
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2146 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 2205
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||
Sbjct 2206 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTTATCAG-GA 2264
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 2265 ACGAAAGTTAGGGG 2278
>seq766
Length=86199
Score = 269 bits (298), Expect = 5e-70
Identities = 241/301 (80%), Gaps = 1/301 (0%)
Strand=Plus/Plus
Query 16 GGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTT 75
|||||||| ||| || | |||| || |||||| ||| | | | || |||||||||
Sbjct 80815 GGCCTTTCTCTCTATAGAACTGCATACCTTTCACTAGGTATACTAGAGAAACAGGACTTT 80874
Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAAT 135
|||||| |||||||||||||| || | |||||||| | || ||||||||||||| ||||
Sbjct 80875 TACTTTAAAAAAATTAGAGTGCTCCAGGCAGGCCTATACTTAAATACATTAGCATAGAAT 80934
Query 136 AATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATA 195
|||| |||| ||||| ||||||||||||| ||||||| |||||| |||| |||||||
Sbjct 80935 AATAAAATAAGACGTATAGTTCTATTTTGTTAGTTTCTAAAACCGCCATAATAATTAATA 80994
Query 196 GGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAG 255
||| ||| | || | |||||| |||| | |||||| |||||||| |||||||| |||
Sbjct 80995 AGGACAGTTAGAGGCATTAGTATTTAATTATTAGAGGTAAAATTCTTAGATTTATTAAAG 81054
Query 256 ACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315
|||||||||||| |||| || || ||| ||||||||||| || || |||| ||||||||
Sbjct 81055 ACTAACTACTGCAAAAGTATTTACTAAGAATGTTTTCATTTATTAG-GAACAAAAGTTAG 81113
Query 316 G 316
|
Sbjct 81114 G 81114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915192760768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |