Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618715.1_202016- 04-12] 791 sequences; 52,719,552 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq222 358 1e-96 seq766 185 1e-44 >seq222 Length=6087 Score = 358 bits (396), Expect = 1e-96 Identities = 237/259 (92%), Gaps = 3/259 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2779 TACTCGCTGGCTCCGTCAGTGTAACGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 2720 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| || Sbjct 2719 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGC 2661 Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | ||| || | || |||||||||||||||||||||||||||||||||||| |||| Sbjct 2660 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 2602 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 2601 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 2542 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 2541 AAAGAGCTCTCAATCTGTC 2523 >seq766 Length=86199 Score = 185 bits (204), Expect = 1e-44 Identities = 196/257 (76%), Gaps = 1/257 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||| | | ||| || |||||| | |||||| ||| | || ||||||||| || |||| Sbjct 81617 TACTTGCTAGCTTTGTTAGTGTAACATGCGTGCAGCCTAAAATATCTAAGGGTATTACAG 81558 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 |||||||||| ||| ||||||| ||| ||| |||| |||||||||||||||||| || Sbjct 81557 ACCTGTTATTACCTTAAACTTCTATTAGCTT-AAGCTAATAGTCCCTCTAAGAAGGTGGC 81499 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | || | ||| |||||||||| |||||||||||| || |||| ||||| Sbjct 81498 GTACTACTAAAGTAATACAGGCTATTTAGTAGGTTAAGGTCTTATTTATTATTATAATTA 81439 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | |||| |||| ||| || ||||||||||||| ||| || || ||| ||| ||| |||| Sbjct 81438 AGCAGATAAATTACTTTACTAACTAAGAACGGCTATGTACTACTACCTATAAAATTAAGA 81379 Query 241 AAGAGCTATCAATCTGT 257 ||||||| | ||| ||| Sbjct 81378 AAGAGCTTTTAATTTGT 81362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796793894271