Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618715.1_202016-
04-12] 791 sequences; 52,719,552 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq222 168 8e-40
seq766 98.7 1e-18
>seq222
Length=6087
Score = 168 bits (186), Expect = 8e-40
Identities = 154/192 (80%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 2136 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 2077
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||| | || |||||||||||| |||| |||||||||||| |||| | |||
Sbjct 2076 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAAAGTCCTGTTTCCCCGGCA 2017
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| |||| ||||| ||| ||| || | ||| | || |||| | |||
Sbjct 2016 CACCCAGTGAAGGGCATGCGGTTCCACAGAGGGAAAGGCCCGGCCGGACCAGTGCACGCG 1957
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 1956 GTGAGGCGGACC 1945
>seq766
Length=86199
Score = 98.7 bits (108), Expect = 1e-18
Identities = 89/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 7 TAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG 66
||||||| |||||||||| ||||| |||| |||||||| |||||||||||||
Sbjct 80973 TAGAAACTAACAAAATAGAACTATACGTCTTATTTTATTATTCTATGCTAATGTATTTAA 80914
Query 67 GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTC 118
| || |||||| | || |||||||||||| | || |||||||||||| |||
Sbjct 80913 GTATAGGCCTGCCTGGAGCACTCTAATTTTTTTAAAGTAAAAGTCCTGTTTC 80862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595195439094
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |