Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618715.1_202016- 04-12] 791 sequences; 52,719,552 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq222 269 3e-70 seq766 163 3e-38 >seq222 Length=6087 Score = 269 bits (298), Expect = 3e-70 Identities = 175/191 (92%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| |||||||||||||||||||||||||||| | || | |||||||| |||||||||| Sbjct 2023 GGAAACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 2082 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 2083 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 2141 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| ||||||||| ||||||||||||||||| ||||||||||| Sbjct 2142 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 2201 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 2202 TTGGATTTATT 2212 >seq766 Length=86199 Score = 163 bits (180), Expect = 3e-38 Identities = 151/190 (79%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 ||| ||||||||||||||| |||||||||||| | || | |||||||| | || ||||| Sbjct 80862 GAAACAGGACTTTTACTTTAAAAAAATTAGAGTGCTCCAGGCAGGCCTATACTTAAATAC 80921 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 |||| ||| |||||||| |||| ||||| |||||||||||| ||||||| |||| | Sbjct 80922 ATTAGCATAGAATAATAAAATAAGACGTATAGTTCTATTTTGTTAGTTTCTAAAACCG-C 80980 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 | |||| || |||| ||| ||| | || | |||||| |||| | | |||| ||||||| Sbjct 80981 CATAATAATTAATAAGGACAGTTAGAGGCATTAGTATTTAATTATTAGAGGTAAAATTCT 81040 Query 182 TGGATTTATT 191 | |||||||| Sbjct 81041 TAGATTTATT 81050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511996076640