Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618715.1_202016-
04-12] 791 sequences; 52,719,552 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq222 269 3e-70
seq766 163 3e-38
>seq222
Length=6087
Score = 269 bits (298), Expect = 3e-70
Identities = 175/191 (92%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||| |||||||||||||||||||||||||||| | || | |||||||| ||||||||||
Sbjct 2023 GGAAACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 2082
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 2083 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 2141
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||| ||||||||| ||||||||||||||||| |||||||||||
Sbjct 2142 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 2201
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 2202 TTGGATTTATT 2212
>seq766
Length=86199
Score = 163 bits (180), Expect = 3e-38
Identities = 151/190 (79%), Gaps = 1/190 (1%)
Strand=Plus/Plus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
||| ||||||||||||||| |||||||||||| | || | |||||||| | || |||||
Sbjct 80862 GAAACAGGACTTTTACTTTAAAAAAATTAGAGTGCTCCAGGCAGGCCTATACTTAAATAC 80921
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121
|||| ||| |||||||| |||| ||||| |||||||||||| ||||||| |||| |
Sbjct 80922 ATTAGCATAGAATAATAAAATAAGACGTATAGTTCTATTTTGTTAGTTTCTAAAACCG-C 80980
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
| |||| || |||| ||| ||| | || | |||||| |||| | | |||| |||||||
Sbjct 80981 CATAATAATTAATAAGGACAGTTAGAGGCATTAGTATTTAATTATTAGAGGTAAAATTCT 81040
Query 182 TGGATTTATT 191
| ||||||||
Sbjct 81041 TAGATTTATT 81050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511996076640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |