Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618715.1_202016-
04-12] 791 sequences; 52,719,552 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq459 356 2e-93
seq576 134 1e-26
>seq459
Length=266450
Score = 356 bits (394), Expect = 2e-93
Identities = 1143/1745 (66%), Gaps = 60/1745 (3%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| |||||||| || | | |||||| |||| || | || ||||||||||| |||
Sbjct 93446 TCGACGGTGAACTGAATGGGAGCAGCAGCAGCCTGCGTGCGCAGGTAGTACATGCCCGTC 93387
Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195
|| ||||| ||| ||| | ||||||||| | || | || |||| | |||| |
Sbjct 93386 TTCAGGCCGAGCTT-CCAGCCGGCGAAATGCAT-GCTGGTTATCTTGCCCATGGTCGGGT 93329
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| || || || || | |||||| ||| |||||| | |||||| || |||||||
Sbjct 93328 CCTTCATGTGAATGTTGAGCGACTGCGACTGGTCGATGAAGGCACCACGGTCGGCAGCCA 93269
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314
| | | | | ||| ||| |||||||| || |||||||||||| | | | ||||||
Sbjct 93268 TCTGCACAACAGTACGCTGCGAGATCTCCCAAACAGTCTTGTACAGG-GCCTTGACCTCA 93210
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374
| ||||| | |||| ||||| ||||| ||||| ||||| || |||
Sbjct 93209 GTAGGAATGTTGGGGATGTTCTGGATGGAACCGTTCTCGGCAATGATGCGGTTCTTCATG 93150
Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTT----GAACCAAGTGACGATTGATGAC 65430
| || ||||||| ||||| |||| |||| | || ||||| | |||| ||
Sbjct 93149 GCATCGGACCACAGACCCATGTCGACGAGATCCTTCAAGAGCCAAGGG----TTGACAAC 93094
Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490
|||||||| || | || |||||||| ||||||||||| ||| ||| |||||| |
Sbjct 93093 CTGGAACTCACCAGCAAGAACACGACGCTGGTAGATGTTGGAGGTGTAGGGCTCAAAGCA 93034
Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550
|| ||||||| | || || | || ||||| |||||||| ||||| | | ||
Sbjct 93033 CTCGTTGTTGCCCAAGATCTGCGAGGTGCTGGCAGTCGGCATGGGCGCGACGAGAAGAGA 92974
Query 65551 GTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGGT 65608
||| || | |||| | | ||| | | ||| | ||||||| ||| | || |
Sbjct 92973 GTTGCGGACACCGTGCTGCTTAATCTGCTCCTTCAAAGCATCCCAGTCCCAGAGATCCG- 92915
Query 65609 TTATCG-TCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGA 65667
| | | ||||| | ||||| || | || ||| | || | | || ||
Sbjct 92914 --AGGGCTTGACATTC------CACATGTCATACTGGAGGATGCCCTGAGAAACAGGGGA 92863
Query 65668 ACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGC--TGGTCTCGAG 65724
||| | | | | ||| |||||||||||||| || || || | |||| |||
Sbjct 92862 ACCCTCGTACGTCTGGTAGGGGCCCTCCTCCTTGGCCAGCTGCACCGACATGGT---GAG 92806
Query 65725 TGCGGCAAAATAAATGGTCTCGAAAATGCGTCGA-TTAAGTTCACGTGCCTCATCGCTCT 65783
|| || || ||||||||||| || | || || || || || ||||| ||
Sbjct 92805 GGCAGCGTGGTAGATGGTCTCGAAGAT-CTTCTTGTTGAGGTCGCGAGCCTCGGGAGACT 92747
Query 65784 CGTACGGCATACCCAT---CAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840
|| | ||||||| | ||||| | | || || ||||| || || || | |||||
Sbjct 92746 CGAAGGGCATACGGAGAGCCAGGA---AGGCATCAGCAAGACCCTGGACACCGAGACCGA 92690
Query 65841 TGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGA 65900
|||| || || |||| ||| | ||||| | |||||||||| |||| ||||
Sbjct 92689 TGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGAACAGGGTAGTGGTTGACGTCGA 92630
Query 65901 TAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCA 65959
| || | |||| ||||| || || || || ||| | || | ||| ||
Sbjct 92629 TGATTCTGTTCAGGTTGCGGACAACGACCTGGGTGACCTCGTGGAGCTTCTG-GAAGTCG 92571
Query 65960 AAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCG 66019
| ||| || || | || ||||| |||| ||||| || || ||
Sbjct 92570 TA--------GAC--TCCCTCGTTGTAGTCA--ACAAAGGTGGGCAGGGCGAGCGAGGCC 92523
Query 66020 AGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTA 66079
|||||||||||||| | ||| ||||| ||| ||||||| ||| || ||||| || ||
Sbjct 92522 AGGTTGCAGACAGCGACCTCATCAGGCGCGCAGTACTCGATAATCTCCGTGCAGAGGTTG 92463
Query 66080 CTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139
|| ||| || ||||| | |||| || || |||||||| ||| |||||||||||
Sbjct 92462 GAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCATCCTTGTAG 92403
Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGT 66199
| |||| | || | || ||||| |||| ||| | |||||| | ||| || |
Sbjct 92402 AGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCAGAGCTTCTGA 92343
Query 66200 GCCTTCACCGTACGTACCGCCCTA-CCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAA 66258
||||||| || | | | |||| || | | ||||| | ||||| | | || ||
Sbjct 92342 GCCTTCATGGT-CTTGCGACCCTTGCCCATCTGCTCGTACTTCTCGTACAAGGCCTCAAA 92284
Query 66259 GGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATC 66318
|| || | |||| ||| | || || | || || ||||| || | ||| ||
Sbjct 92283 CTCCTCGCCGTAGCAGTCGGCCAGGCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGTC 92224
Query 66319 ACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATC 66378
|||| || || || | ||| || || || || |||||||||||| ||| || ||
Sbjct 92223 CCCATTCTTCTCCACCCTCTTCATGAAGAGGTCGGGAATCCAGAGGGCGAGGAAAAGGTC 92164
Query 66379 GCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTC 66438
|| || || |||||| ||||||| || |||||||| || | ||| || |||| ||
Sbjct 92163 ACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAAATCCAAGAAGTCGAAGACATC 92104
Query 66439 GGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTC 66498
||| ||||| || || ||||| |||||||| | || || ||| |||||| |||||
Sbjct 92103 GGCGTGCCAAGGCTCAAGGTAAATGGCGAAAGCACCGGGGCGCTTGTTGCCACCCTGGTC 92044
Query 66499 GACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCC 66558
|||||||||||| |||||||||||||| | ||| || |||| ||||| || | ||
Sbjct 92043 GACGTAGCGAGCAGTGTTGTTGAAGACACGGAGCATAGGGACGACACCGTTGGAGGTACC 91984
Query 66559 ATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACC 66618
|| |||||| | || || || || || || ||| || || |||||||| ||
Sbjct 91983 GTTCGTGCCGGCAATATATGAGCCGGTGGCGCGGATGCGGTGGACGTTGAGACCAATGCC 91924
Query 66619 ACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCAATG 66676
||||||| |||| ||||| || ||| || | |||| | || || |||||
Sbjct 91923 ACCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGGGTGTC--ATAGATACCCTCAATA 91866
Query 66677 GAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCC 66736
||||| |||| ||| | |||| |||| || || |||| | || || ||||
Sbjct 91865 GAGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGACAGCTGGGCCTGAGGGGTACCGGCG 91806
Query 66737 GAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCG 66796
|||||| ||||| | ||||| || ||| | | || ||||| ||||| || |||
Sbjct 91805 TTGAAGAGTGTGGGAGAGGCGTGAGTGAAGAACTTGCTCGACATCAGGTTGTAGGTTTCG 91746
Query 66797 ATGAC 66801
|||||
Sbjct 91745 ATGAC 91741
>seq576
Length=178989
Score = 134 bits (148), Expect = 1e-26
Identities = 289/425 (68%), Gaps = 9/425 (2%)
Strand=Plus/Plus
Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569
|| |||||| | || ||||| || | || ||| | ||||| ||| | ||||| |||||
Sbjct 150809 GTTGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGT 150868
Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629
||||||||||||||||||||| ||| ||| |||| || || || ||||| | ||
Sbjct 150869 CTTATGCCCGGTCTGACCTTCTCCAACGAGCTGATCTCTCGTGATGAGGGTCTTCACACC 150928
Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCCGTCGGAGGAGCGTGT 61688
|| || || | || | || || | || ||| || || || || |
Sbjct 150929 GACTTCGCCTGCCTCCTCT----ACTCTCACCTCAAGAACCGCCCCAGCAAGCAGGTCAT 150984
Query 61689 GGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGC 61747
| || || | ||| || || || | || || ||||| || ||||| || ||| |||
Sbjct 150985 TGAGGACATCAT-CGTCGATGCTGTCAAGATTGAGCAGGAGTTCCTGACCGAGGCTCTGC 151043
Query 61748 CCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCG 61807
| | | || |||||||||| | || ||| |||||| ||||| ||||||||||
Sbjct 151044 CTTGCGCTCTGCTCGGCATGAACTCCAACCTGATGAAGCAGTACATTGAGTTTGTTGCCG 151103
Query 61808 ACCGTCTGTTGGTCGAT-TTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGAT 61866
|||| || ||||| | | | || |||| || |||| || | ||||| |||||
Sbjct 151104 ACCGCCTCTTGGTTGCTCTCGGCAATGACAAGG-TCTACAAGTCTTCCAACCCCTTTGAC 151162
Query 61867 TTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGAC 61926
|||||||| | || || |||| |||||||| || || || ||||| ||||| | ||||
Sbjct 151163 TTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTTGAGAAGCGTGTTGCCGAC 151222
Query 61927 TATCA 61931
|| ||
Sbjct 151223 TACCA 151227
Score = 127 bits (140), Expect = 2e-24
Identities = 209/297 (70%), Gaps = 7/297 (2%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| | || ||
Sbjct 150323 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCTTTCTGGACCGCCGAGGAGATTGACCTG 150382
Query 61147 TCCAAAGACATGAATGACTGGGAGCGT----TTATCGAGCGGTGAACAACATTTCATTAA 61202
||||| || | | |||||| | | | | |||| | ||| | | |||||
Sbjct 150383 TCCAAGGATCTCCACGACTGGAACAATAAGATCAACGAG-GATGAGAAGTACTTCATCTC 150441
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| | | || ||||| |||||||| ||||| || ||||||||||| || | || ||
Sbjct 150442 GCACATCCTCGCCTTCTTCGCCGCTTCTGACGGCATTGTCAATGAGAACTTGGTCGAGCG 150501
Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| ||| ||||| || || | ||||| ||||| ||||| |||||||| || |
Sbjct 150502 CTTCAGCG-GCGAGGTCCAGGTCCCCGAGGCCCGTTGCTTCTATGGCTTCCAAATCATGA 150560
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
||||||| ||||||| |||| ||| | |||||||| || ||||||| |||||
Sbjct 150561 TGGAGAACATCCACTCCGAGACCTACTCGCTGCTCATCGACACCTACATCAAGGAGC 150617
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397564167320240
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