Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618725.1_202016-
04-12] 1,647 sequences; 53,491,261 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq1639 168 8e-40
>seq1639
Length=5844
Score = 168 bits (186), Expect = 8e-40
Identities = 154/192 (80%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 3709 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 3768
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||| | || |||||||||||| |||| |||||||||||| |||| | |||
Sbjct 3769 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAAAGTCCTGTTTCCCCGGCA 3828
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| |||| ||||| ||| ||| || | ||| | || |||| | |||
Sbjct 3829 CACCCAGTGAAGGGCATGCGGTTCCACAGAGGGAAAGGCCCGGCCGGACCAGTGCACGCG 3888
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 3889 GTGAGGCGGACC 3900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595190503398
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |