Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618725.1_202016-
04-12] 1,647 sequences; 53,491,261 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq273 356 2e-93
seq1177 134 1e-26
>seq273
Length=152475
Score = 356 bits (394), Expect = 2e-93
Identities = 1143/1745 (66%), Gaps = 60/1745 (3%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| |||||||| || | | |||||| |||| || | || ||||||||||| |||
Sbjct 73131 TCGACGGTGAACTGAATGGGAGCAGCAGCAGCCTGCGTGCGCAGGTAGTACATGCCCGTC 73072
Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195
|| ||||| ||| ||| | ||||||||| | || | || |||| | |||| |
Sbjct 73071 TTCAGGCCGAGCTT-CCAGCCGGCGAAATGCAT-GCTGGTTATCTTGCCCATGGTCGGGT 73014
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| || || || || | |||||| ||| |||||| | |||||| || |||||||
Sbjct 73013 CCTTCATGTGAATGTTGAGCGACTGCGACTGGTCGATGAAGGCACCACGGTCGGCAGCCA 72954
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314
| | | | | ||| ||| |||||||| || |||||||||||| | | | ||||||
Sbjct 72953 TCTGCACAACAGTACGCTGCGAGATCTCCCAAACAGTCTTGTACAGG-GCCTTGACCTCA 72895
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374
| ||||| | |||| ||||| ||||| ||||| ||||| || |||
Sbjct 72894 GTAGGAATGTTGGGGATGTTCTGGATGGAACCGTTCTCGGCAATGATGCGGTTCTTCATG 72835
Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTT----GAACCAAGTGACGATTGATGAC 65430
| || ||||||| ||||| |||| |||| | || ||||| | |||| ||
Sbjct 72834 GCATCGGACCACAGACCCATGTCGACGAGATCCTTCAAGAGCCAAGGG----TTGACAAC 72779
Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490
|||||||| || | || |||||||| ||||||||||| ||| ||| |||||| |
Sbjct 72778 CTGGAACTCACCAGCAAGAACACGACGCTGGTAGATGTTGGAGGTGTAGGGCTCAAAGCA 72719
Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550
|| ||||||| | || || | || ||||| |||||||| ||||| | | ||
Sbjct 72718 CTCGTTGTTGCCCAAGATCTGCGAGGTGCTGGCAGTCGGCATGGGCGCGACGAGAAGAGA 72659
Query 65551 GTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGGT 65608
||| || | |||| | | ||| | | ||| | ||||||| ||| | || |
Sbjct 72658 GTTGCGGACACCGTGCTGCTTAATCTGCTCCTTCAAAGCATCCCAGTCCCAGAGATCCG- 72600
Query 65609 TTATCG-TCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGA 65667
| | | ||||| | ||||| || | || ||| | || | | || ||
Sbjct 72599 --AGGGCTTGACATTC------CACATGTCATACTGGAGGATGCCCTGAGAAACAGGGGA 72548
Query 65668 ACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGC--TGGTCTCGAG 65724
||| | | | | ||| |||||||||||||| || || || | |||| |||
Sbjct 72547 ACCCTCGTACGTCTGGTAGGGGCCCTCCTCCTTGGCCAGCTGCACCGACATGGT---GAG 72491
Query 65725 TGCGGCAAAATAAATGGTCTCGAAAATGCGTCGA-TTAAGTTCACGTGCCTCATCGCTCT 65783
|| || || ||||||||||| || | || || || || || ||||| ||
Sbjct 72490 GGCAGCGTGGTAGATGGTCTCGAAGAT-CTTCTTGTTGAGGTCGCGAGCCTCGGGAGACT 72432
Query 65784 CGTACGGCATACCCAT---CAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840
|| | ||||||| | ||||| | | || || ||||| || || || | |||||
Sbjct 72431 CGAAGGGCATACGGAGAGCCAGGA---AGGCATCAGCAAGACCCTGGACACCGAGACCGA 72375
Query 65841 TGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGA 65900
|||| || || |||| ||| | ||||| | |||||||||| |||| ||||
Sbjct 72374 TGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGAACAGGGTAGTGGTTGACGTCGA 72315
Query 65901 TAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCA 65959
| || | |||| ||||| || || || || ||| | || | ||| ||
Sbjct 72314 TGATTCTGTTCAGGTTGCGGACAACGACCTGGGTGACCTCGTGGAGCTTCTG-GAAGTCG 72256
Query 65960 AAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCG 66019
| ||| || || | || ||||| |||| ||||| || || ||
Sbjct 72255 TA--------GAC--TCCCTCGTTGTAGTCA--ACAAAGGTGGGCAGGGCGAGCGAGGCC 72208
Query 66020 AGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTA 66079
|||||||||||||| | ||| ||||| ||| ||||||| ||| || ||||| || ||
Sbjct 72207 AGGTTGCAGACAGCGACCTCATCAGGCGCGCAGTACTCGATAATCTCCGTGCAGAGGTTG 72148
Query 66080 CTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139
|| ||| || ||||| | |||| || || |||||||| ||| |||||||||||
Sbjct 72147 GAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCATCCTTGTAG 72088
Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGT 66199
| |||| | || | || ||||| |||| ||| | |||||| | ||| || |
Sbjct 72087 AGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCAGAGCTTCTGA 72028
Query 66200 GCCTTCACCGTACGTACCGCCCTA-CCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAA 66258
||||||| || | | | |||| || | | ||||| | ||||| | | || ||
Sbjct 72027 GCCTTCATGGT-CTTGCGACCCTTGCCCATCTGCTCGTACTTCTCGTACAAGGCCTCAAA 71969
Query 66259 GGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATC 66318
|| || | |||| ||| | || || | || || ||||| || | ||| ||
Sbjct 71968 CTCCTCGCCGTAGCAGTCGGCCAGGCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGTC 71909
Query 66319 ACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATC 66378
|||| || || || | ||| || || || || |||||||||||| ||| || ||
Sbjct 71908 CCCATTCTTCTCCACCCTCTTCATGAAGAGGTCGGGAATCCAGAGGGCGAGGAAAAGGTC 71849
Query 66379 GCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTC 66438
|| || || |||||| ||||||| || |||||||| || | ||| || |||| ||
Sbjct 71848 ACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAAATCCAAGAAGTCGAAGACATC 71789
Query 66439 GGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTC 66498
||| ||||| || || ||||| |||||||| | || || ||| |||||| |||||
Sbjct 71788 GGCGTGCCAAGGCTCAAGGTAAATGGCGAAAGCACCGGGGCGCTTGTTGCCACCCTGGTC 71729
Query 66499 GACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCC 66558
|||||||||||| |||||||||||||| | ||| || |||| ||||| || | ||
Sbjct 71728 GACGTAGCGAGCAGTGTTGTTGAAGACACGGAGCATAGGGACGACACCGTTGGAGGTACC 71669
Query 66559 ATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACC 66618
|| |||||| | || || || || || || ||| || || |||||||| ||
Sbjct 71668 GTTCGTGCCGGCAATATATGAGCCGGTGGCGCGGATGCGGTGGACGTTGAGACCAATGCC 71609
Query 66619 ACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCAATG 66676
||||||| |||| ||||| || ||| || | |||| | || || |||||
Sbjct 71608 ACCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGGGTGTC--ATAGATACCCTCAATA 71551
Query 66677 GAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCC 66736
||||| |||| ||| | |||| |||| || || |||| | || || ||||
Sbjct 71550 GAGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGACAGCTGGGCCTGAGGGGTACCGGCG 71491
Query 66737 GAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCG 66796
|||||| ||||| | ||||| || ||| | | || ||||| ||||| || |||
Sbjct 71490 TTGAAGAGTGTGGGAGAGGCGTGAGTGAAGAACTTGCTCGACATCAGGTTGTAGGTTTCG 71431
Query 66797 ATGAC 66801
|||||
Sbjct 71430 ATGAC 71426
>seq1177
Length=83355
Score = 134 bits (148), Expect = 1e-26
Identities = 289/425 (68%), Gaps = 9/425 (2%)
Strand=Plus/Minus
Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569
|| |||||| | || ||||| || | || ||| | ||||| ||| | ||||| |||||
Sbjct 26828 GTTGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGT 26769
Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629
||||||||||||||||||||| ||| ||| |||| || || || ||||| | ||
Sbjct 26768 CTTATGCCCGGTCTGACCTTCTCCAACGAGCTGATCTCTCGTGATGAGGGTCTTCACACC 26709
Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCCGTCGGAGGAGCGTGT 61688
|| || || | || | || || | || ||| || || || || |
Sbjct 26708 GACTTCGCCTGCCTCCTCT----ACTCTCACCTCAAGAACCGCCCCAGCAAGCAGGTCAT 26653
Query 61689 GGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGC 61747
| || || | ||| || || || | || || ||||| || ||||| || ||| |||
Sbjct 26652 TGAGGACATCAT-CGTCGATGCTGTCAAGATTGAGCAGGAGTTCCTGACCGAGGCTCTGC 26594
Query 61748 CCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCG 61807
| | | || |||||||||| | || ||| |||||| ||||| ||||||||||
Sbjct 26593 CTTGCGCTCTGCTCGGCATGAACTCCAACCTGATGAAGCAGTACATTGAGTTTGTTGCCG 26534
Query 61808 ACCGTCTGTTGGTCGAT-TTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGAT 61866
|||| || ||||| | | | || |||| || |||| || | ||||| |||||
Sbjct 26533 ACCGCCTCTTGGTTGCTCTCGGCAATGACAAGG-TCTACAAGTCTTCCAACCCCTTTGAC 26475
Query 61867 TTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGAC 61926
|||||||| | || || |||| |||||||| || || || ||||| ||||| | ||||
Sbjct 26474 TTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTTGAGAAGCGTGTTGCCGAC 26415
Query 61927 TATCA 61931
|| ||
Sbjct 26414 TACCA 26410
Score = 132 bits (146), Expect = 4e-26
Identities = 210/297 (71%), Gaps = 7/297 (2%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| | ||| ||
Sbjct 27314 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCTTTCTGGACCGCCGAGGAGATTGATCTG 27255
Query 61147 TCCAAAGACATGAATGACTGGGAGCGT----TTATCGAGCGGTGAACAACATTTCATTAA 61202
||||| || | | |||||| | | | | |||| | ||| | | |||||
Sbjct 27254 TCCAAGGATCTCCACGACTGGAACAATAAGATCAACGAG-GATGAGAAGTACTTCATCTC 27196
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| | | || ||||| |||||||| ||||| || ||||||||||| || | || ||
Sbjct 27195 GCACATCCTCGCCTTCTTCGCCGCTTCTGACGGCATTGTCAATGAGAACTTGGTCGAGCG 27136
Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| ||| ||||| || || | ||||| ||||| ||||| |||||||| || |
Sbjct 27135 CTTCAGCG-GCGAGGTCCAGGTCCCCGAGGCCCGTTGCTTCTATGGCTTCCAAATCATGA 27077
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
||||||| ||||||| |||| ||| | |||||||| || ||||||| |||||
Sbjct 27076 TGGAGAACATCCACTCCGAGACCTACTCGCTGCTCATCGACACCTACATCAAGGAGC 27020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397560019692080
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