Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618725.1_202016-
04-12] 1,647 sequences; 53,491,261 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq780 91.5 6e-13
>seq780
Length=70611
Score = 91.5 bits (100), Expect = 6e-13
Identities = 107/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484
|||| ||||||||||| ||||||| | | || ||||||||||| || ||| ||||| |
Sbjct 19610 CAATGGTCATACGAGACGGAATGGCGTGGGGATTGATGATGATATCCGGCGTGATGCCCT 19669
Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544
| ||||| |||||||| ||||| | | | | | |||||| || ||||| || | |
Sbjct 19670 CGGCGGTGAAGGGCATGTCTTCCTGTCGGTAGGTAACACCAATAGTACCCTTCTGACCGT 19729
Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569
|| || || || ||||| |||||
Sbjct 19730 GACGCGACGCGAATTTGTCACCAAT 19754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884846624773771
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |