Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001618735.1_202016- 04-12] 476 sequences; 53,216,229 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq58 102 2e-19 >seq58 Length=26200 Score = 102 bits (112), Expect = 2e-19 Identities = 136/188 (72%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| |||||||| | ||||||| | |||||| || | | |||||| Sbjct 14662 CAAGTCATCATGGCCCTTATGTTGTGGGCTATAGACGTGCCACGTAGTCCTTAACAAAGA 14603 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAA-GTTGTTCTCAGTTC-----GGATT 419 | |||||| |||| | ||| |||| || ||| | | | | | || ||||| Sbjct 14602 GATGCGAAAATGCGAATTTTAGCTAATCTCAAAAAAGAGGATATAAATTATACAAGGATT 14543 Query 420 GTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTA 479 |||||||| |||||||||||||||| | ||| ||||||||||| |||| |||| | Sbjct 14542 GTAGTCTGAAACTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATCACCATGTCA 14483 Query 480 CGGTGAAT 487 |||||||| Sbjct 14482 CGGTGAAT 14475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503992840960