Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001625265.1_202016-
04-19] 1,046 sequences; 52,836,184 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq91 134 3e-29
>seq91
Length=152652
Score = 134 bits (148), Expect = 3e-29
Identities = 201/285 (71%), Gaps = 18/285 (6%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||||||||| | ||||||||
Sbjct 146379 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 146438
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
|||||||| ||||| |||| | | | | ||| | | ||||| |||||||||||||||||
Sbjct 146439 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGA 146498
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC----------TTCGC 176
|| | | |||| ||||||| || ||||||| ||| |||| | | ||
Sbjct 146499 CCCTCA-CGTTAAGGCCGCCATTAACCGGGGGTTCCTTCAACACCAAATTTTTTGATCAA 146557
Query 177 GTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCC 236
|||| ||| || |||||| |||||| ||||||| | |||||| | |||| ||
Sbjct 146558 TTTAGTTAA----ATTCGTTAACCAGCCGGCATCGGGCAGACATCACACTCAATACTTCG 146613
Query 237 ACTTT---CGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| ||| | || ||| ||||||||||||| | ||||||||||
Sbjct 146614 ATTTTTAATCTTTTAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 146658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260786812032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |