Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001625265.1_202016- 04-19] 1,046 sequences; 52,836,184 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq35 214 4e-53 >seq35 Length=282 Score = 214 bits (236), Expect = 4e-53 Identities = 156/179 (87%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 191 AATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAG 250 ||||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||||| Sbjct 1 AATCCGACCTAGGCTCATCTGATAGCGTGAGGTCCGAAGATCCCCCACTTTCTCCCGTAG 60 Query 251 GACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAGGCAGATTCCT 310 |||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||| Sbjct 61 GACGTATGCGGTATTAGCGTCCCTTTCGAGACGTTGTCCCCCACTACCAGGCAGATTCCT 120 Query 311 AGGCATTACTCACCCGTCCGCCGCT--CTCAAGAGAAGCAAGCTTCTCTCTACCGCTCG 367 ||||||||||||||||||||||||| ||| | |||||||| | || ||||||| Sbjct 121 AGGCATTACTCACCCGTCCGCCGCTGAATCA--GGGAGCAAGCTCCCTTCATCCGCTCG 177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071988786880