Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001625265.1_202016-
04-19] 1,046 sequences; 52,836,184 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq35 214 4e-53
>seq35
Length=282
Score = 214 bits (236), Expect = 4e-53
Identities = 156/179 (87%), Gaps = 4/179 (2%)
Strand=Plus/Plus
Query 191 AATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAG 250
||||||||||||||||||||||||||| ||| |||||| ||||| |||||||||||||
Sbjct 1 AATCCGACCTAGGCTCATCTGATAGCGTGAGGTCCGAAGATCCCCCACTTTCTCCCGTAG 60
Query 251 GACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAGGCAGATTCCT 310
|||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||
Sbjct 61 GACGTATGCGGTATTAGCGTCCCTTTCGAGACGTTGTCCCCCACTACCAGGCAGATTCCT 120
Query 311 AGGCATTACTCACCCGTCCGCCGCT--CTCAAGAGAAGCAAGCTTCTCTCTACCGCTCG 367
||||||||||||||||||||||||| ||| | |||||||| | || |||||||
Sbjct 121 AGGCATTACTCACCCGTCCGCCGCTGAATCA--GGGAGCAAGCTCCCTTCATCCGCTCG 177
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1071988786880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |