Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001625265.1_202016-
04-19] 1,046 sequences; 52,836,184 total letters
Query= AAMG01002175.1
Length=414
Score E
Sequences producing significant alignments: (Bits) Value
seq35 176 1e-41
>seq35
Length=282
Score = 176 bits (194), Expect = 1e-41
Identities = 178/226 (79%), Gaps = 12/226 (5%)
Strand=Plus/Plus
Query 192 AATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCT-TGC 250
||||| | || || ||||| ||||| | |||| |||||| |||||| |||| | |
Sbjct 1 AATCCGACCTAGGCTCATCTGATAGCGTGAGGTCCGAAGATCCCCCACTTTCTCCCGTAG 60
Query 251 GACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCC 310
||||| ||||||||||||| || |||| || ||| |||||| | | ||||||| ||||
Sbjct 61 GACGT-ATGCGGTATTAGCGTCCCTTTCGAGACGTTGTCCCCCACTACCAGGCAGATTCC 119
Query 311 CAGACATTACTCACCCGTCCGCCACT-CGTCAGCGAAGCAGCAAGCT-GCTTCCTGTTAC 368
|| ||||||||||||||||||| || |||| | |||||||| |||| | |
Sbjct 120 TAGGCATTACTCACCCGTCCGCCGCTGAATCAG----GGAGCAAGCTCCCTTCAT----C 171
Query 369 CGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
|| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 172 CGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1222387213696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |