Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20tofieldiae_20[genbank_20GCA_5F001625265.1_202016-
04-19] 1,046 sequences; 52,836,184 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq82 356 2e-93
seq268 134 1e-26
>seq82
Length=153332
Score = 356 bits (394), Expect = 2e-93
Identities = 1143/1745 (66%), Gaps = 60/1745 (3%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| |||||||| || | | |||||| |||| || | || ||||||||||| |||
Sbjct 73143 TCGACGGTGAACTGAATGGGAGCAGCAGCAGCCTGCGTGCGCAGGTAGTACATGCCCGTC 73084
Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195
|| ||||| ||| ||| | ||||||||| | || | || |||| | |||| |
Sbjct 73083 TTCAGGCCGAGCTT-CCAGCCGGCGAAATGCAT-GCTGGTTATCTTGCCCATGGTCGGGT 73026
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| || || || || | |||||| ||| |||||| | |||||| || |||||||
Sbjct 73025 CCTTCATGTGAATGTTGAGCGACTGCGACTGGTCGATGAAGGCACCACGGTCGGCAGCCA 72966
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314
| | | | | ||| ||| |||||||| || |||||||||||| | | | ||||||
Sbjct 72965 TCTGCACAACAGTACGCTGCGAGATCTCCCAAACAGTCTTGTACAGG-GCCTTGACCTCA 72907
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374
| ||||| | |||| ||||| ||||| ||||| ||||| || |||
Sbjct 72906 GTAGGAATGTTGGGGATGTTCTGGATGGAACCGTTCTCGGCAATGATGCGGTTCTTCATG 72847
Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTT----GAACCAAGTGACGATTGATGAC 65430
| || ||||||| ||||| |||| |||| | || ||||| | |||| ||
Sbjct 72846 GCATCGGACCACAGACCCATGTCGACGAGATCCTTCAAGAGCCAAGGG----TTGACAAC 72791
Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490
|||||||| || | || |||||||| ||||||||||| ||| ||| |||||| |
Sbjct 72790 CTGGAACTCACCAGCAAGAACACGACGCTGGTAGATGTTGGAGGTGTAGGGCTCAAAGCA 72731
Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550
|| ||||||| | || || | || ||||| |||||||| ||||| | | ||
Sbjct 72730 CTCGTTGTTGCCCAAGATCTGCGAGGTGCTGGCAGTCGGCATGGGCGCGACGAGAAGAGA 72671
Query 65551 GTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGGT 65608
||| || | |||| | | ||| | | ||| | ||||||| ||| | || |
Sbjct 72670 GTTGCGGACACCGTGCTGCTTAATCTGCTCCTTCAAAGCATCCCAGTCCCAGAGATCCG- 72612
Query 65609 TTATCG-TCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGA 65667
| | | ||||| | ||||| || | || ||| | || | | || ||
Sbjct 72611 --AGGGCTTGACATTC------CACATGTCATACTGGAGGATGCCCTGAGAAACAGGGGA 72560
Query 65668 ACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGC--TGGTCTCGAG 65724
||| | | | | ||| |||||||||||||| || || || | |||| |||
Sbjct 72559 ACCCTCGTACGTCTGGTAGGGGCCCTCCTCCTTGGCCAGCTGCACCGACATGGT---GAG 72503
Query 65725 TGCGGCAAAATAAATGGTCTCGAAAATGCGTCGA-TTAAGTTCACGTGCCTCATCGCTCT 65783
|| || || ||||||||||| || | || || || || || ||||| ||
Sbjct 72502 GGCAGCGTGGTAGATGGTCTCGAAGAT-CTTCTTGTTGAGGTCGCGAGCCTCGGGAGACT 72444
Query 65784 CGTACGGCATACCCAT---CAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840
|| | ||||||| | ||||| | | || || ||||| || || || | |||||
Sbjct 72443 CGAAGGGCATACGGAGAGCCAGGA---AGGCATCAGCAAGACCCTGGACACCGAGACCGA 72387
Query 65841 TGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGA 65900
|||| || || |||| ||| | ||||| | |||||||||| |||| ||||
Sbjct 72386 TGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGAACAGGGTAGTGGTTGACGTCGA 72327
Query 65901 TAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCA 65959
| || | |||| ||||| || || || || ||| | || | ||| ||
Sbjct 72326 TGATTCTGTTCAGGTTGCGGACAACGACCTGGGTGACCTCGTGGAGCTTCTG-GAAGTCG 72268
Query 65960 AAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCG 66019
| ||| || || | || ||||| |||| ||||| || || ||
Sbjct 72267 TA--------GAC--TCCCTCGTTGTAGTCA--ACAAAGGTGGGCAGGGCGAGCGAGGCC 72220
Query 66020 AGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTA 66079
|||||||||||||| | ||| ||||| ||| ||||||| ||| || ||||| || ||
Sbjct 72219 AGGTTGCAGACAGCGACCTCATCAGGCGCGCAGTACTCGATAATCTCCGTGCAGAGGTTG 72160
Query 66080 CTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139
|| ||| || ||||| | |||| || || |||||||| ||| |||||||||||
Sbjct 72159 GAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCATCCTTGTAG 72100
Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGT 66199
| |||| | || | || ||||| |||| ||| | |||||| | ||| || |
Sbjct 72099 AGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCAGAGCTTCTGA 72040
Query 66200 GCCTTCACCGTACGTACCGCCCTA-CCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAA 66258
||||||| || | | | |||| || | | ||||| | ||||| | | || ||
Sbjct 72039 GCCTTCATGGT-CTTGCGACCCTTGCCCATCTGCTCGTACTTCTCGTACAAGGCCTCAAA 71981
Query 66259 GGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATC 66318
|| || | |||| ||| | || || | || || ||||| || | ||| ||
Sbjct 71980 CTCCTCGCCGTAGCAGTCGGCCAGGCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGTC 71921
Query 66319 ACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATC 66378
|||| || || || | ||| || || || || |||||||||||| ||| || ||
Sbjct 71920 CCCATTCTTCTCCACCCTCTTCATGAAGAGGTCGGGAATCCAGAGGGCGAGGAAAAGGTC 71861
Query 66379 GCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTC 66438
|| || || |||||| ||||||| || |||||||| || | ||| || |||| ||
Sbjct 71860 ACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAAATCCAAGAAGTCGAAGACATC 71801
Query 66439 GGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTC 66498
||| ||||| || || ||||| |||||||| | || || ||| |||||| |||||
Sbjct 71800 GGCGTGCCAAGGCTCAAGGTAAATGGCGAAAGCACCGGGGCGCTTGTTGCCACCCTGGTC 71741
Query 66499 GACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCC 66558
|||||||||||| |||||||||||||| | ||| || |||| ||||| || | ||
Sbjct 71740 GACGTAGCGAGCAGTGTTGTTGAAGACACGGAGCATAGGGACGACACCGTTGGAGGTACC 71681
Query 66559 ATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACC 66618
|| |||||| | || || || || || || ||| || || |||||||| ||
Sbjct 71680 GTTCGTGCCGGCAATATATGAGCCGGTGGCGCGGATGCGGTGGACGTTGAGACCAATGCC 71621
Query 66619 ACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCAATG 66676
||||||| |||| ||||| || ||| || | |||| | || || |||||
Sbjct 71620 ACCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGGGTGTC--ATAGATACCCTCAATA 71563
Query 66677 GAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCC 66736
||||| |||| ||| | |||| |||| || || |||| | || || ||||
Sbjct 71562 GAGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGACAGCTGGGCCTGAGGGGTACCGGCG 71503
Query 66737 GAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCG 66796
|||||| ||||| | ||||| || ||| | | || ||||| ||||| || |||
Sbjct 71502 TTGAAGAGTGTGGGAGAGGCGTGAGTGAAGAACTTGCTCGACATCAGGTTGTAGGTTTCG 71443
Query 66797 ATGAC 66801
|||||
Sbjct 71442 ATGAC 71438
>seq268
Length=131150
Score = 134 bits (148), Expect = 1e-26
Identities = 289/425 (68%), Gaps = 9/425 (2%)
Strand=Plus/Plus
Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569
|| |||||| | || ||||| || | || ||| | ||||| ||| | ||||| |||||
Sbjct 103408 GTTGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGT 103467
Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629
||||||||||||||||||||| ||| ||| |||| || || || ||||| | ||
Sbjct 103468 CTTATGCCCGGTCTGACCTTCTCCAACGAGCTGATCTCTCGTGATGAGGGTCTTCACACC 103527
Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCCGTCGGAGGAGCGTGT 61688
|| || || | || | || || | || ||| || || || || |
Sbjct 103528 GACTTCGCCTGCCTCCTCT----ACTCTCACCTCAAGAACCGCCCCAGCAAGCAGGTCAT 103583
Query 61689 GGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGC 61747
| || || | ||| || || || | || || ||||| || ||||| || ||| |||
Sbjct 103584 TGAGGACATCAT-CGTCGATGCTGTCAAGATTGAGCAGGAGTTCCTGACCGAGGCTCTGC 103642
Query 61748 CCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCG 61807
| | | || |||||||||| | || ||| |||||| ||||| ||||||||||
Sbjct 103643 CTTGCGCTCTGCTCGGCATGAACTCCAACCTGATGAAGCAGTACATTGAGTTTGTTGCCG 103702
Query 61808 ACCGTCTGTTGGTCGAT-TTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGAT 61866
|||| || ||||| | | | || |||| || |||| || | ||||| |||||
Sbjct 103703 ACCGCCTCTTGGTTGCTCTCGGCAATGACAAGG-TCTACAAGTCTTCCAACCCCTTTGAC 103761
Query 61867 TTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGAC 61926
|||||||| | || || |||| |||||||| || || || ||||| ||||| | ||||
Sbjct 103762 TTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTTGAGAAGCGTGTTGCCGAC 103821
Query 61927 TATCA 61931
|| ||
Sbjct 103822 TACCA 103826
Score = 127 bits (140), Expect = 2e-24
Identities = 209/297 (70%), Gaps = 7/297 (2%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| | || ||
Sbjct 102922 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCTTTCTGGACCGCCGAGGAGATTGACCTG 102981
Query 61147 TCCAAAGACATGAATGACTGGGAGCGT----TTATCGAGCGGTGAACAACATTTCATTAA 61202
||||| || | | |||||| | | | | |||| | ||| | | |||||
Sbjct 102982 TCCAAGGATCTCCACGACTGGAACAATAAGATCAACGAG-GATGAGAAGTACTTCATCTC 103040
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| | | || ||||| |||||||| ||||| || ||||||||||| || | || ||
Sbjct 103041 GCACATCCTCGCCTTCTTCGCCGCTTCTGACGGCATTGTCAATGAGAACTTGGTCGAGCG 103100
Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| ||| ||||| || || | ||||| ||||| ||||| |||||||| || |
Sbjct 103101 CTTCAGCG-GCGAGGTCCAGGTCCCCGAGGCCCGTTGCTTCTATGGCTTCCAAATCATGA 103159
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
||||||| ||||||| |||| ||| | |||||||| || ||||||| |||||
Sbjct 103160 TGGAGAACATCCACTCCGAGACCTACTCGCTGCTCATCGACACCTACATCAAGGAGC 103216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397562931753440
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