Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cordyceps_20confragosa_20[genbank_20GCA_5F001653215.1_202016-05-27]
4,750 sequences; 32,603,708 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq683 183 5e-44
seq2578 118 2e-24
>seq683
Length=799
Score = 183 bits (202), Expect = 5e-44
Identities = 149/176 (85%), Gaps = 5/176 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 172 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 115
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | ||||||
Sbjct 114 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 55
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175
|||||| ||| ||||||||| || ||||| || | | |||||||||||||||
Sbjct 54 ACCCGGGCCTTTCGGCCAAG--GAAGTACTCGCTGGCTCCGTCAGTGTAGCGCGCG 1
>seq2578
Length=820
Score = 118 bits (130), Expect = 2e-24
Identities = 65/65 (100%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 164 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 820 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 761
Query 224 CTTCC 228
|||||
Sbjct 760 CTTCC 756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751965396250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |