Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cordyceps_20confragosa_20[genbank_20GCA_5F001653215.1_202016-05-27] 4,750 sequences; 32,603,708 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq683 183 5e-44 seq2578 118 2e-24 >seq683 Length=799 Score = 183 bits (202), Expect = 5e-44 Identities = 149/176 (85%), Gaps = 5/176 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 172 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 115 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | |||||| Sbjct 114 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 55 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175 |||||| ||| ||||||||| || ||||| || | | ||||||||||||||| Sbjct 54 ACCCGGGCCTTTCGGCCAAG--GAAGTACTCGCTGGCTCCGTCAGTGTAGCGCGCG 1 >seq2578 Length=820 Score = 118 bits (130), Expect = 2e-24 Identities = 65/65 (100%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 164 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 820 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 761 Query 224 CTTCC 228 ||||| Sbjct 760 CTTCC 756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751965396250