Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cordyceps_20confragosa_20[genbank_20GCA_5F001653215.1_202016-05-27]
4,750 sequences; 32,603,708 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq2578 98.7 6e-19
seq3965 75.2 6e-12
>seq2578
Length=820
Score = 98.7 bits (108), Expect = 6e-19
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| || ||||||| ||||||||| ||
Sbjct 75 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGCGTCAAAA-AATAACATCGTCC 17
Query 61 GATCCCTAGTCGGCAT 76
||||||||||||||||
Sbjct 16 GATCCCTAGTCGGCAT 1
>seq3965
Length=6290
Score = 75.2 bits (82), Expect = 6e-12
Identities = 52/58 (90%), Gaps = 1/58 (2%)
Strand=Plus/Plus
Query 19 TTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCAT 76
|| |||||||||||||| || ||||||| ||||||||| ||||||||||||||||||
Sbjct 6234 TTTTCGTAAGGTGCCGAACGCGTCAAAAA-ATAACATCGTCCGATCCCTAGTCGGCAT 6290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278387602500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |