Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cordyceps_20confragosa_20[genbank_20GCA_5F001653215.1_202016-05-27] 4,750 sequences; 32,603,708 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq2578 98.7 6e-19 seq3965 75.2 6e-12 >seq2578 Length=820 Score = 98.7 bits (108), Expect = 6e-19 Identities = 68/76 (89%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct 75 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGCGTCAAAA-AATAACATCGTCC 17 Query 61 GATCCCTAGTCGGCAT 76 |||||||||||||||| Sbjct 16 GATCCCTAGTCGGCAT 1 >seq3965 Length=6290 Score = 75.2 bits (82), Expect = 6e-12 Identities = 52/58 (90%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 19 TTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCAT 76 || |||||||||||||| || ||||||| ||||||||| |||||||||||||||||| Sbjct 6234 TTTTCGTAAGGTGCCGAACGCGTCAAAAA-ATAACATCGTCCGATCCCTAGTCGGCAT 6290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278387602500