Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cordyceps_20confragosa_20[genbank_20GCA_5F001653215.1_202016-05-27]
4,750 sequences; 32,603,708 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq1537 419 4e-115
seq2497 84.2 4e-14
>seq1537
Length=321
Score = 419 bits (464), Expect = 4e-115
Identities = 262/282 (93%), Gaps = 0/282 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||||||||||||||||||| |||| ||| || |||||||||||||||||||| ||||||
Sbjct 282 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCTCATGCCCTTCACTGGGTGTGGCGGGGA 223
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||||||||||||||||||| || | |||||||| |||||||||||||
Sbjct 222 AACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACAT 163
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 162 TAGCATGGAATAATGAAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 103
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 102 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 43
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGAT 286
||||||||||||||||||||||||||||| || ||||||||
Sbjct 42 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGAT 1
>seq2497
Length=1482
Score = 84.2 bits (92), Expect = 4e-14
Identities = 51/54 (94%), Gaps = 0/54 (0%)
Strand=Plus/Plus
Query 233 TGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGAT 286
||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1429 TGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGAT 1482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915156528000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |