Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cordyceps_20confragosa_20[genbank_20GCA_5F001653215.1_202016-05-27] 4,750 sequences; 32,603,708 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq3730 378 3e-102 seq248 343 6e-92 >seq3730 Length=1814 Score = 378 bits (418), Expect = 3e-102 Identities = 287/333 (86%), Gaps = 8/333 (2%) Strand=Plus/Plus Query 352 CGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCG 411 |||| |||||||||| ||||| || | ||||||||||||||||||| | |||| |||| Sbjct 16 CGCC-GGACTGAGGTACGCGCATCG-CAAGGATGCTGGCGTAATGGTCATCAGCGACCCG 73 Query 412 TCTTGGAACACGGACCAAGGAGTCTAACATC-TATGCGAGTGTTTGGGTGTCAAACCCGT 470 ||||| |||||||||||||||||| | || |||||||||||| ||||||||||||| | Sbjct 74 TCTTGAAACACGGACCAAGGAGTCGT-CTTCGTATGCGAGTGTTCGGGTGTCAAACCCCT 132 Query 471 GCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTG 530 ||||||||||||||||||| ||||| || | || ||| ||||||||||||||| Sbjct 133 ACGCGTAATGAAAGTGAACGCAGGTGAGAGCTTC----GGCGCATCATCGACCGATCCTG 188 Query 531 ATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTA 590 |||| ||||||||||||||||||||||||| | |||||||||||| ||||||||| Sbjct 189 ATGTTCTCGGATGGATTTGAGTAAGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTA 248 Query 591 TGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTG 650 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 249 TGCCTGTATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTG 308 Query 651 CAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||||||||||||||| |||| || ||||||| Sbjct 309 CGAATCGATCGTCAAATATGGGCATGGGGGCGA 341 >seq248 Length=616 Score = 343 bits (380), Expect = 6e-92 Identities = 269/315 (85%), Gaps = 6/315 (2%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| |||||||||||| |||| |||||||||||| || Sbjct 321 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATGGGAGGTATAT 262 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 261 GTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 202 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||| | Sbjct 201 TGAAAAGCACTTTGAAAAGAGGGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCCT 142 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261 |||||||||| | | || ||| || || ||| || |||||||| | | | | Sbjct 141 ATGACCAGACTTGGGCCCGGTGAATCATCCAGCGTTCTC-GCTGGTGCACTTTGCCGGGC 83 Query 262 TCAGGCCAGCATCAGCTCGG-GCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320 |||||||||||||| | || |||| |||||||||| ||||||||||| |||| | Sbjct 82 ACAGGCCAGCATCAGTTTGGCGCGG-GGGATAAAGGCTTTGGGAATGTGGCTCCCT--CG 26 Query 321 GGGGTGTTATAGCCC 335 || |||||||||||| Sbjct 25 GGAGTGTTATAGCCC 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079898112500