Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cordyceps_20confragosa_20[genbank_20GCA_5F001653215.1_202016-05-27]
4,750 sequences; 32,603,708 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq3730 378 3e-102
seq248 343 6e-92
>seq3730
Length=1814
Score = 378 bits (418), Expect = 3e-102
Identities = 287/333 (86%), Gaps = 8/333 (2%)
Strand=Plus/Plus
Query 352 CGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCG 411
|||| |||||||||| ||||| || | ||||||||||||||||||| | |||| ||||
Sbjct 16 CGCC-GGACTGAGGTACGCGCATCG-CAAGGATGCTGGCGTAATGGTCATCAGCGACCCG 73
Query 412 TCTTGGAACACGGACCAAGGAGTCTAACATC-TATGCGAGTGTTTGGGTGTCAAACCCGT 470
||||| |||||||||||||||||| | || |||||||||||| ||||||||||||| |
Sbjct 74 TCTTGAAACACGGACCAAGGAGTCGT-CTTCGTATGCGAGTGTTCGGGTGTCAAACCCCT 132
Query 471 GCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTG 530
||||||||||||||||||| ||||| || | || ||| |||||||||||||||
Sbjct 133 ACGCGTAATGAAAGTGAACGCAGGTGAGAGCTTC----GGCGCATCATCGACCGATCCTG 188
Query 531 ATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTA 590
|||| ||||||||||||||||||||||||| | |||||||||||| |||||||||
Sbjct 189 ATGTTCTCGGATGGATTTGAGTAAGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTA 248
Query 591 TGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTG 650
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 249 TGCCTGTATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTG 308
Query 651 CAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
| ||||||||||||||| |||| || |||||||
Sbjct 309 CGAATCGATCGTCAAATATGGGCATGGGGGCGA 341
>seq248
Length=616
Score = 343 bits (380), Expect = 6e-92
Identities = 269/315 (85%), Gaps = 6/315 (2%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| |||| |||||||||||| ||
Sbjct 321 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATGGGAGGTATAT 262
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 261 GTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 202
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||| |
Sbjct 201 TGAAAAGCACTTTGAAAAGAGGGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCCT 142
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261
|||||||||| | | || ||| || || ||| || |||||||| | | | |
Sbjct 141 ATGACCAGACTTGGGCCCGGTGAATCATCCAGCGTTCTC-GCTGGTGCACTTTGCCGGGC 83
Query 262 TCAGGCCAGCATCAGCTCGG-GCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320
|||||||||||||| | || |||| |||||||||| ||||||||||| |||| |
Sbjct 82 ACAGGCCAGCATCAGTTTGGCGCGG-GGGATAAAGGCTTTGGGAATGTGGCTCCCT--CG 26
Query 321 GGGGTGTTATAGCCC 335
|| ||||||||||||
Sbjct 25 GGAGTGTTATAGCCC 11
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079898112500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |