Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cordyceps_20confragosa_20[genbank_20GCA_5F001653215.1_202016-05-27]
4,750 sequences; 32,603,708 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq4258 125 2e-26
>seq4258
Length=5986
Score = 125 bits (138), Expect = 2e-26
Identities = 195/275 (71%), Gaps = 8/275 (3%)
Strand=Plus/Minus
Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70
||| |||| |||||| ||| ||||||||||||||| | |||||||| ||||
Sbjct 3201 CTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCG 3142
Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130
|||| |||||| |||| | | | | ||| | | ||||| ||||||||||||||||||| |
Sbjct 3141 TTACACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCT 3082
Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGT----TAGCTAAC 186
| |||| ||||||| || ||||||||||| | | | | || || ||
Sbjct 3081 CA-CGTTAAGGCCGCCTTTAACCGGGGCTTCCGTTGACATCAAATAGTAATATATTCAAT 3023
Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTTCGTG 245
|| ||| || |||||||||||||| |||||| ||||| | | ||| |
Sbjct 3022 TATCTCTGTTAGCCAGCCGGCACCGGGCAGATATCACACTTTATACATAGATTTTTAATC 2963
Query 246 TTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
||| ||| ||||||||||||| | ||||||||||
Sbjct 2962 TTTAAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 2928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260740112000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |