Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cordyceps_20confragosa_20[genbank_20GCA_5F001653215.1_202016-05-27] 4,750 sequences; 32,603,708 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1212 82.4 2e-13 >seq1212 Length=774 Score = 82.4 bits (90), Expect = 2e-13 Identities = 128/182 (70%), Gaps = 1/182 (1%) Strand=Plus/Minus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || | || | ||||||| | |||||| ||| | | |||||||| Sbjct 286 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATAAGCCTATACAAAGA 227 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | || ||| | || | |||||||| | ||| | | | ||||||||||| Sbjct 226 GATGCAAAAATGTGAATTTTAGCAAATCTCCAAAATAGGAAATAAAAA-GGATTGTAGTC 168 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485 || || ||||||| ||||| | ||| ||||||||||| |||| |||| ||||||| Sbjct 167 TGAAATTCGACTACATGAATAAGTAATTACTAGTAATCGTGAATCACCATGTCACGGTGA 108 Query 486 AT 487 || Sbjct 107 AT 106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503928560000