Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cordyceps_20confragosa_20[genbank_20GCA_5F001653215.1_202016-05-27]
4,750 sequences; 32,603,708 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq2578 325 6e-87
>seq2578
Length=820
Score = 325 bits (360), Expect = 6e-87
Identities = 219/241 (91%), Gaps = 3/241 (1%)
Strand=Plus/Minus
Query 19 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 820 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 761
Query 79 CTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATG 138
||||||| |||| || ||| ||||||||||||||||||| | | ||| || | ||
Sbjct 760 CTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGTGTACTGCCAAAG-CAATA 703
Query 139 G-GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCC 197
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct 702 CAGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCC 643
Query 198 ACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257
|||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||
Sbjct 642 ACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTCAATCTGT 583
Query 258 C 258
|
Sbjct 582 C 582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796763334750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |