Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cordyceps_20confragosa_20[genbank_20GCA_5F001653215.1_202016-05-27]
4,750 sequences; 32,603,708 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq2448 199 7e-49
>seq2448
Length=2390
Score = 199 bits (220), Expect = 7e-49
Identities = 113/115 (98%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1356 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 1297
Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 1296 ATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTT 1242
Score = 159 bits (176), Expect = 6e-37
Identities = 93/95 (98%), Gaps = 1/95 (1%)
Strand=Plus/Minus
Query 202 CAGTT-ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAG 260
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 780 CAGTTCATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAG 721
Query 261 GATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||
Sbjct 720 GATCGATAGGCCACACTTTCATGGTTTGTATTCAC 686
Score = 140 bits (154), Expect = 6e-31
Identities = 87/92 (95%), Gaps = 1/92 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct 1927 TACTAAGCTGAATTACCATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 1869
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
|||||||||||||||||||||||||||||||
Sbjct 1868 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 1837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854359416000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |