Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cordyceps_20confragosa_20[genbank_20GCA_5F001653215.1_202016-05-27] 4,750 sequences; 32,603,708 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq683 242 7e-62 seq2578 223 7e-56 seq1802 84.2 4e-14 >seq683 Length=799 Score = 242 bits (268), Expect = 7e-62 Identities = 158/173 (91%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 156 CGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATC 215 |||||||||||||||| |||||| ||||| | || |||||||| |||| | |||||||| Sbjct 1 CGCGCGCTACACTGACGGAGCCAGCGAGTACTTC--CTTGGCCGAAAGGCCCGGGTAATC 58 Query 216 TTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAAT 275 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 59 TTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAAT 118 Query 276 GCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 119 CCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTTGTA 171 >seq2578 Length=820 Score = 223 bits (246), Expect = 7e-56 Identities = 138/148 (93%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | |||||||| | | |||||||||||| Sbjct 673 GAACGAGACCTTAACCTGCTAAATAGCCTGTATTGCTTTGGCAGTACACCGGCTTCTTAG 732 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 733 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 792 Query 140 GATGTTCTGGGCCGCACGCGCGCTACAC 167 |||||||||||||||||||||||||||| Sbjct 793 GATGTTCTGGGCCGCACGCGCGCTACAC 820 >seq1802 Length=36658 Score = 84.2 bits (92), Expect = 4e-14 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287 ||| ||| ||||||||||||| ||| ||||||||| || |||||| | ||| ||| | Sbjct 32958 GTCATGCGAGGGATAGAGCATTACAAATATTGCTCTCTAATTAGGAATCCTTAGCAAGAG 32899 Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||| || ||||| |||||||| ||||||||| || Sbjct 32898 CAACTCATCTGCTTGCGTTCATTACGTCTCTGCCCTTTATA 32858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947155008000