Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cordyceps_20confragosa_20[genbank_20GCA_5F001653215.1_202016-05-27] 4,750 sequences; 32,603,708 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2448 363 5e-98 seq2876 253 7e-65 seq3730 178 4e-42 >seq2448 Length=2390 Score = 363 bits (402), Expect = 5e-98 Identities = 256/291 (88%), Gaps = 5/291 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 654 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 595 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 594 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 535 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||| |||||| ||| | || |||| |||||||||||| Sbjct 534 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGAC--AAAAATCCAGCCCCGCTTCATTGA 477 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| || Sbjct 476 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 420 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||||||||| | ||| |||||||| ||| |||||||||||||||||| Sbjct 419 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAAC 369 >seq2876 Length=493 Score = 253 bits (280), Expect = 7e-65 Identities = 143/145 (99%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 457 CAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCATTCCCTTGGCTGTGGTTTCGCTAG 398 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 397 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 338 Query 417 ACGAGGCATTTGGCTACCTTAAGAG 441 ||||||||||||||||||||||||| Sbjct 337 ACGAGGCATTTGGCTACCTTAAGAG 313 >seq3730 Length=1814 Score = 178 bits (196), Expect = 4e-42 Identities = 101/103 (98%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1673 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTC 1614 Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1613 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 1571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635122328000