Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cordyceps_20confragosa_20[genbank_20GCA_5F001653215.1_202016-05-27]
4,750 sequences; 32,603,708 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq2448 228 1e-57
seq2556 93.3 7e-17
>seq2448
Length=2390
Score = 228 bits (252), Expect = 1e-57
Identities = 223/282 (79%), Gaps = 13/282 (5%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 1925 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1982
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1983 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 2042
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| |||||| | | || |||| | ||| ||| | |||||||||||||| |
Sbjct 2043 GAACGCGGTGATAC-CACCCGCACGT-ATAGATGGACAAGAATAGGCTTCGGCTTTGTGT 2100
Query 181 CTTAGCAGGC----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGAT 236
|| ||||||| | | |||| || |||||| | || | | ||| ||
Sbjct 2101 CTCAGCAGGCGATTCCTCCACGG-----CCACGGAAGAGTGGTCTTGGTATTTCGCGTAT 2155
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||||| || | || ||| ||||||||||||||||||
Sbjct 2156 TGTAATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 2197
>seq2556
Length=31711
Score = 93.3 bits (102), Expect = 7e-17
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116
|||||||| || ||||||||||| ||||| |||||||||||||| || ||||||||||
Sbjct 11143 CAGTGCCGTGACGCTACCATCTGTTGGATCATGGCTGAACGCCTTCGAGCCAGAATCCAT 11084
Query 117 GCCAGAACGGGGTG 130
||||||||| ||||
Sbjct 11083 GCCAGAACGCGGTG 11070
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819162304000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |