Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corynespora_20cassiicola_20[genbank_20GCA_5F900169545.1_202017-03- 16] 774 sequences; 42,503,748 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq298 508 1e-141 seq353 134 3e-29 >seq298 Length=14438 Score = 508 bits (562), Expect = 1e-141 Identities = 304/318 (96%), Gaps = 1/318 (0%) Strand=Plus/Minus Query 1 TACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCG 60 |||||| ||||||||||||||||||||||| || || ||||||||||||||||||||| | Sbjct 5304 TACTTG-TCCGGCCGGGCCTTTCCTTCTGGAGAACCTCATGCCCTTCACTGGGTGTGCTG 5246 Query 61 GGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 120 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5245 GGGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 5186 Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180 || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 5185 ACGTTAGCATGGAATAATAGAATAGGACGTGCGGTCCTATTTTGTTGGTTTCTAGGACCG 5126 Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240 ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 5125 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 5066 Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct 5065 TTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA 5006 Query 301 GTGAACGAAAGTTAGGGG 318 |||||||||||||||||| Sbjct 5005 GTGAACGAAAGTTAGGGG 4988 >seq353 Length=5136 Score = 134 bits (148), Expect = 3e-29 Identities = 176/244 (72%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 ||||||||||| ||||||||| ||| || |||| | || ||| || ||||| |||| || Sbjct 3631 ACTTTTACTTTAAAAAAATTAAAGTATTTAAAGTAAGCTTTTACTTAAATACGTTAGTAT 3572 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||| |||| | | || |||||| || |||| || || | ||||| || Sbjct 3571 AAAATAATAAAATAAAATATATACTTTTATTTTATTAGTTTTTAAAACTACTGTAATAAT 3512 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||| ||||| || | |||||| |||| | ||| || ||||| || ||||||| Sbjct 3511 TAATAAAAATAGTTAAAAGTATTAGTATTTAATTATTAGAAGTAAAATTTTTAGATTTAT 3452 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 | || |||||||||| ||| || || || || |||| |||||| ||| || ||| Sbjct 3451 TAAAAACTAACTACTATAAAAATATTTACTAAAAATATTTTTATTAATTAGTAAATAAAA 3392 Query 311 GTTA 314 |||| Sbjct 3391 GTTA 3388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915192916352