Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Corynespora_20cassiicola_20[genbank_20GCA_5F900169545.1_202017-03-
16] 774 sequences; 42,503,748 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq298 508 1e-141
seq353 134 3e-29
>seq298
Length=14438
Score = 508 bits (562), Expect = 1e-141
Identities = 304/318 (96%), Gaps = 1/318 (0%)
Strand=Plus/Minus
Query 1 TACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCG 60
|||||| ||||||||||||||||||||||| || || ||||||||||||||||||||| |
Sbjct 5304 TACTTG-TCCGGCCGGGCCTTTCCTTCTGGAGAACCTCATGCCCTTCACTGGGTGTGCTG 5246
Query 61 GGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5245 GGGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 5186
Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 5185 ACGTTAGCATGGAATAATAGAATAGGACGTGCGGTCCTATTTTGTTGGTTTCTAGGACCG 5126
Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 5125 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 5066
Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300
||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 5065 TTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA 5006
Query 301 GTGAACGAAAGTTAGGGG 318
||||||||||||||||||
Sbjct 5005 GTGAACGAAAGTTAGGGG 4988
>seq353
Length=5136
Score = 134 bits (148), Expect = 3e-29
Identities = 176/244 (72%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130
||||||||||| ||||||||| ||| || |||| | || ||| || ||||| |||| ||
Sbjct 3631 ACTTTTACTTTAAAAAAATTAAAGTATTTAAAGTAAGCTTTTACTTAAATACGTTAGTAT 3572
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
||||||| |||| | | || |||||| || |||| || || | ||||| ||
Sbjct 3571 AAAATAATAAAATAAAATATATACTTTTATTTTATTAGTTTTTAAAACTACTGTAATAAT 3512
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||||| ||||| || | |||||| |||| | ||| || ||||| || |||||||
Sbjct 3511 TAATAAAAATAGTTAAAAGTATTAGTATTTAATTATTAGAAGTAAAATTTTTAGATTTAT 3452
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
| || |||||||||| ||| || || || || |||| |||||| ||| || |||
Sbjct 3451 TAAAAACTAACTACTATAAAAATATTTACTAAAAATATTTTTATTAATTAGTAAATAAAA 3392
Query 311 GTTA 314
||||
Sbjct 3391 GTTA 3388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915192916352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |