Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corynespora_20cassiicola_20[genbank_20GCA_5F900169545.1_202017-03- 16] 774 sequences; 42,503,748 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq390 95.1 3e-17 >seq390 Length=43746 Score = 95.1 bits (104), Expect = 3e-17 Identities = 273/419 (65%), Gaps = 27/419 (6%) Strand=Plus/Plus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||||||| || ||| || |||||||||| | | |||||||| |||||| | Sbjct 19330 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGCATCGTGAG 19389 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 ||||| ||| | | | ||| | ||||| ||||||||||||||||||| | || Sbjct 19390 ATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCTCATA 19449 Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC---GTTAG----CTAACC 187 | || ||||||| || | |||| ||| |||| | || | |||| |||| Sbjct 19450 GGTAAGGCCGCCATTAAATGGGGGTTCCTTCAAAACCTAGCCTATTTTAGTCGTCTAAGT 19509 Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247 ||| |||||| || || |||||| | ||| |||||| | | || | | || Sbjct 19510 AAATCCGTTAACCAGCCATCATTGGGCAGATAGCGCACTCTATACATTGATTTACATCTT 19569 Query 248 -TGCAGAGTGCTGTGTTTTTAATAAACAGTC--GCAGCGGCCTGGTAT-----CTTCGAC 299 ||| ||||||||||||| | ||||||||| ||| | | | ||| || | | Sbjct 19570 ACGCAAAGTGCTGTGTTTTAATTAAACAGTCGTGCAACACCATTCTATGTCTCCTCCCCC 19629 Query 300 CGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTAC 359 | ||| |||| || | | | ||| ||||||||||| |||||| Sbjct 19630 TATCCTGATATTACTCAGTAGG------------AGTGGCACACCTTCTCCCTCAGTTAC 19677 Query 360 GGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 |||| | |||||| |||||||| ||| ||||| |||||| ||||||||||| Sbjct 19678 GGTGTCAATTTGCCGAGTTCCTTAATGATTGTTAGCTCAAACGCCTTCGTATTCTCTAC 19736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260790241408