Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Corynespora_20cassiicola_20[genbank_20GCA_5F900169545.1_202017-03-
16] 774 sequences; 42,503,748 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq390 95.1 3e-17
>seq390
Length=43746
Score = 95.1 bits (104), Expect = 3e-17
Identities = 273/419 (65%), Gaps = 27/419 (6%)
Strand=Plus/Plus
Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74
|||||||| || ||| || |||||||||| | | |||||||| |||||| |
Sbjct 19330 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGCATCGTGAG 19389
Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134
||||| ||| | | | ||| | ||||| ||||||||||||||||||| | ||
Sbjct 19390 ATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCTCATA 19449
Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC---GTTAG----CTAACC 187
| || ||||||| || | |||| ||| |||| | || | |||| ||||
Sbjct 19450 GGTAAGGCCGCCATTAAATGGGGGTTCCTTCAAAACCTAGCCTATTTTAGTCGTCTAAGT 19509
Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247
||| |||||| || || |||||| | ||| |||||| | | || | | ||
Sbjct 19510 AAATCCGTTAACCAGCCATCATTGGGCAGATAGCGCACTCTATACATTGATTTACATCTT 19569
Query 248 -TGCAGAGTGCTGTGTTTTTAATAAACAGTC--GCAGCGGCCTGGTAT-----CTTCGAC 299
||| ||||||||||||| | ||||||||| ||| | | | ||| || | |
Sbjct 19570 ACGCAAAGTGCTGTGTTTTAATTAAACAGTCGTGCAACACCATTCTATGTCTCCTCCCCC 19629
Query 300 CGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTAC 359
| ||| |||| || | | | ||| ||||||||||| ||||||
Sbjct 19630 TATCCTGATATTACTCAGTAGG------------AGTGGCACACCTTCTCCCTCAGTTAC 19677
Query 360 GGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418
|||| | |||||| |||||||| ||| ||||| |||||| |||||||||||
Sbjct 19678 GGTGTCAATTTGCCGAGTTCCTTAATGATTGTTAGCTCAAACGCCTTCGTATTCTCTAC 19736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260790241408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |