Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corynespora_20cassiicola_20[genbank_20GCA_5F900169545.1_202017-03- 16] 774 sequences; 42,503,748 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq390 87.8 4e-15 >seq390 Length=43746 Score = 87.8 bits (96), Expect = 4e-15 Identities = 259/389 (67%), Gaps = 44/389 (11%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG----TGCCCAAATCG 64 |||||||| | ||| || |||||| ||| | || ||||||||| ||| |||| Sbjct 19330 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGC----ATCG 19385 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 | | | ||| |||| | | | ||| | ||||| ||||||||||||||||||| | Sbjct 19386 TGAGATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCT 19445 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA----CT-GC---TTCGATTGCTC 176 |||| || ||||||| || | ||||| || |||| || || || | | || Sbjct 19446 CATAGGTAAGGCCGCCATTAAATGGGGGTT-CCTTCAAAACCTAGCCTATTTTAGTCGTC 19504 Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAG---GCGTCAGCTCCTATACATCGTCT 233 ||| | || |||||| ||| || |||||| ||| || || |||||||| | | Sbjct 19505 TAAGTAAATCCGTTAACCAGCCATCATTGGGCAGATAGCG-CA-CT-CTATACATTGATT 19561 Query 234 TGCGACTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCG-----CTTGGGCCTAT-TCT 286 | | |||| ||| | ||||||||| |||||||||| | |||| ||| Sbjct 19562 TACATCTTACGCAAAGTGCTGTGTTTTAATTAAACAGTCGTGCAACACCATTCTATGTCT 19621 Query 287 CTGCGGCCTGTC---ATA-----------GACAGGCACCCCTTCTCCCTAAGTTACGGGG 332 | | ||| || ||| || ||||| |||||||||| |||||||| | Sbjct 19622 CCTCCCCCTATCCTGATATTACTCAGTAGGAGTGGCACACCTTCTCCCTCAGTTACGGTG 19681 Query 333 TCATTTTGCCGAGTTCCTTAACAATAGTT 361 ||| ||||||||||||||||| || ||| Sbjct 19682 TCAATTTGCCGAGTTCCTTAATGATTGTT 19710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062391777024