Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Corynespora_20cassiicola_20[genbank_20GCA_5F900169545.1_202017-03-
16] 774 sequences; 42,503,748 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq390 87.8 4e-15
>seq390
Length=43746
Score = 87.8 bits (96), Expect = 4e-15
Identities = 259/389 (67%), Gaps = 44/389 (11%)
Strand=Plus/Plus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG----TGCCCAAATCG 64
|||||||| | ||| || |||||| ||| | || ||||||||| ||| ||||
Sbjct 19330 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGC----ATCG 19385
Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124
| | | ||| |||| | | | ||| | ||||| ||||||||||||||||||| |
Sbjct 19386 TGAGATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCT 19445
Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA----CT-GC---TTCGATTGCTC 176
|||| || ||||||| || | ||||| || |||| || || || | | ||
Sbjct 19446 CATAGGTAAGGCCGCCATTAAATGGGGGTT-CCTTCAAAACCTAGCCTATTTTAGTCGTC 19504
Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAG---GCGTCAGCTCCTATACATCGTCT 233
||| | || |||||| ||| || |||||| ||| || || |||||||| | |
Sbjct 19505 TAAGTAAATCCGTTAACCAGCCATCATTGGGCAGATAGCG-CA-CT-CTATACATTGATT 19561
Query 234 TGCGACTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCG-----CTTGGGCCTAT-TCT 286
| | |||| ||| | ||||||||| |||||||||| | |||| |||
Sbjct 19562 TACATCTTACGCAAAGTGCTGTGTTTTAATTAAACAGTCGTGCAACACCATTCTATGTCT 19621
Query 287 CTGCGGCCTGTC---ATA-----------GACAGGCACCCCTTCTCCCTAAGTTACGGGG 332
| | ||| || ||| || ||||| |||||||||| |||||||| |
Sbjct 19622 CCTCCCCCTATCCTGATATTACTCAGTAGGAGTGGCACACCTTCTCCCTCAGTTACGGTG 19681
Query 333 TCATTTTGCCGAGTTCCTTAACAATAGTT 361
||| ||||||||||||||||| || |||
Sbjct 19682 TCAATTTGCCGAGTTCCTTAATGATTGTT 19710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062391777024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |