Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corynespora_20cassiicola_20[genbank_20GCA_5F900169545.1_202017-03- 16] 774 sequences; 42,503,748 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq390 78.8 3e-12 >seq390 Length=43746 Score = 78.8 bits (86), Expect = 3e-12 Identities = 138/195 (71%), Gaps = 7/195 (4%) Strand=Plus/Minus Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 ||||| | | ||| |||||||| || | ||| | ||||||| | |||||| ||| | Sbjct 25738 GGGACTAAGACAAGTCATCATGGCCTTAATGTTGTGGGCTATAGACGTGCCACATATACC 25679 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415 ||||||||| || | | |||| | ||| ||||| |||| | | ||| | Sbjct 25678 TTTACAAAGGGATGCAAGAATGCGAATTGGAGCTAATCCT-TAAAATAGGAAAAAGTATG 25620 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGT-AG--ATCAG 472 |||||||||||| || |||||| ||||| ||||| ||||||||||| || |||| Sbjct 25619 GATTGTAGTCTGAAATTCGACTGCATGAAAAAGGAATTACTAGTAATCGTGAGTAATCA- 25561 Query 473 CATGCTACGGTGAAT 487 ||| ||||||||| Sbjct 25560 CAT--CACGGTGAAT 25548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503988359040