Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corynespora_20cassiicola_20[genbank_20GCA_5F900169545.1_202017-03- 16] 774 sequences; 42,503,748 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq298 288 1e-75 seq353 73.4 4e-11 >seq298 Length=14438 Score = 288 bits (318), Expect = 1e-75 Identities = 179/191 (94%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 5244 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 5185 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 | ||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct 5184 CGTTAGCATGGAATAATAGAATAGGACGTGCGGTCCTATTTTGTTGGTTTCTAGGACCG- 5126 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| ||||||||| ||||||||||||||||| ||||||||||| Sbjct 5125 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 5066 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 5065 TTGGATTTATT 5055 >seq353 Length=5136 Score = 73.4 bits (80), Expect = 4e-11 Identities = 126/182 (69%), Gaps = 1/182 (1%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCAT 69 ||||||||||| ||||||||| || || |||| | || ||| || ||||| ||| || Sbjct 3631 ACTTTTACTTTAAAAAAATTAAAGTATTTAAAGTAAGCTTTTACTTAAATACGTTAGTAT 3572 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 ||||||| |||| | | || |||||| | |||| || | | | ||||| | Sbjct 3571 AAAATAATAAAATAAAATATATACTTTTATTTTATTAGTTTTTA-AAACTACTGTAATAA 3513 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | |||| ||||| || | |||||| |||| | | | || ||||| || |||||| Sbjct 3512 TTAATAAAAATAGTTAAAAGTATTAGTATTTAATTATTAGAAGTAAAATTTTTAGATTTA 3453 Query 190 TT 191 || Sbjct 3452 TT 3451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511996160960