Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Corynespora_20cassiicola_20[genbank_20GCA_5F900169545.1_202017-03-
16] 774 sequences; 42,503,748 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq298 288 1e-75
seq353 73.4 4e-11
>seq298
Length=14438
Score = 288 bits (318), Expect = 1e-75
Identities = 179/191 (94%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 5244 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 5185
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
| ||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 5184 CGTTAGCATGGAATAATAGAATAGGACGTGCGGTCCTATTTTGTTGGTTTCTAGGACCG- 5126
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||| ||||||||| ||||||||||||||||| |||||||||||
Sbjct 5125 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 5066
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 5065 TTGGATTTATT 5055
>seq353
Length=5136
Score = 73.4 bits (80), Expect = 4e-11
Identities = 126/182 (69%), Gaps = 1/182 (1%)
Strand=Plus/Minus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCAT 69
||||||||||| ||||||||| || || |||| | || ||| || ||||| ||| ||
Sbjct 3631 ACTTTTACTTTAAAAAAATTAAAGTATTTAAAGTAAGCTTTTACTTAAATACGTTAGTAT 3572
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
||||||| |||| | | || |||||| | |||| || | | | ||||| |
Sbjct 3571 AAAATAATAAAATAAAATATATACTTTTATTTTATTAGTTTTTA-AAACTACTGTAATAA 3513
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| |||| ||||| || | |||||| |||| | | | || ||||| || ||||||
Sbjct 3512 TTAATAAAAATAGTTAAAAGTATTAGTATTTAATTATTAGAAGTAAAATTTTTAGATTTA 3453
Query 190 TT 191
||
Sbjct 3452 TT 3451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511996160960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |