Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corynespora_20cassiicola_20[genbank_20GCA_5F900169545.1_202017-03- 16] 774 sequences; 42,503,748 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq298 535 8e-150 seq353 86.0 1e-14 seq681 75.2 2e-11 >seq298 Length=14438 Score = 535 bits (592), Expect = 8e-150 Identities = 304/309 (98%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 4651 GAACGAGACCTTAACCTGCTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 4592 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4591 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 4532 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 4531 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCTTCACCTTGGCCG 4472 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4471 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 4412 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4411 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 4352 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 4351 CCCTTTGTA 4343 >seq353 Length=5136 Score = 86.0 bits (94), Expect = 1e-14 Identities = 190/285 (67%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 27 ACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACT 86 || ||||| | ||||||||| || | ||||| || ||||| |||| ||| | ||| Sbjct 3040 ACTTTAACTTACTAAATAGCTAGACTAGCTTTAGCTAGTCGCTAGCTTTTTAAAAAAACT 2981 Query 87 ATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTC 146 || | |||| || |||||| | ||||| | | | | || ||| || || Sbjct 2980 ATTAATTTAAGCTAATAAAAGTTTAAAATAATAATAAATTTATAATATTTTTAAATATTT 2921 Query 147 TGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTC 206 | || |||||||||| ||| | | ||| || |||| | | || || || || Sbjct 2920 TAAGCTATACGCGCGCTATACTAATAAAGCTAATAAGTTTTTTATTTTAGCTAAAAAGTT 2861 Query 207 TGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCA 266 | ||||| || ||||||||| | | || | ||| || ||| ||||||| | || | Sbjct 2860 TAAGTAATTTTATTAAACTCTATTATACTAGAAATAAAGTATTATAATTATTATTTTTTA 2801 Query 267 ACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 | | ||| | |||||||||||||| || ||||| |||| |||| Sbjct 2800 ATAAAAAATACTTAGTAAGCGCGTGTTATTAGCACACGTTAATTA 2756 >seq681 Length=422576 Score = 75.2 bits (82), Expect = 2e-11 Identities = 72/91 (79%), Gaps = 5/91 (5%) Strand=Plus/Plus Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84 |||| | || | ||| ||||||| | ||||||| |||||| ||||| |||||| Sbjct 68785 AGACGTCAATCCGCTGGATAGCCAAGGTAGCTTTGG----TCGCCGTCTTCTCAGAGGGC 68840 Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGC 115 |||||||||||||| |||||||| ||||||| Sbjct 68841 CTATCGGCTCAAGCTGATGGAAG-TTGAGGC 68870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947192668672