Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Corynespora_20cassiicola_20[genbank_20GCA_5F900169545.1_202017-03-
16] 774 sequences; 42,503,748 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq298 535 8e-150
seq353 86.0 1e-14
seq681 75.2 2e-11
>seq298
Length=14438
Score = 535 bits (592), Expect = 8e-150
Identities = 304/309 (98%), Gaps = 0/309 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 4651 GAACGAGACCTTAACCTGCTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 4592
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4591 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 4532
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 4531 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCTTCACCTTGGCCG 4472
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4471 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 4412
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4411 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 4352
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 4351 CCCTTTGTA 4343
>seq353
Length=5136
Score = 86.0 bits (94), Expect = 1e-14
Identities = 190/285 (67%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 27 ACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACT 86
|| ||||| | ||||||||| || | ||||| || ||||| |||| ||| | |||
Sbjct 3040 ACTTTAACTTACTAAATAGCTAGACTAGCTTTAGCTAGTCGCTAGCTTTTTAAAAAAACT 2981
Query 87 ATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTC 146
|| | |||| || |||||| | ||||| | | | | || ||| || ||
Sbjct 2980 ATTAATTTAAGCTAATAAAAGTTTAAAATAATAATAAATTTATAATATTTTTAAATATTT 2921
Query 147 TGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTC 206
| || |||||||||| ||| | | ||| || |||| | | || || || ||
Sbjct 2920 TAAGCTATACGCGCGCTATACTAATAAAGCTAATAAGTTTTTTATTTTAGCTAAAAAGTT 2861
Query 207 TGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCA 266
| ||||| || ||||||||| | | || | ||| || ||| ||||||| | || |
Sbjct 2860 TAAGTAATTTTATTAAACTCTATTATACTAGAAATAAAGTATTATAATTATTATTTTTTA 2801
Query 267 ACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311
| | ||| | |||||||||||||| || ||||| |||| ||||
Sbjct 2800 ATAAAAAATACTTAGTAAGCGCGTGTTATTAGCACACGTTAATTA 2756
>seq681
Length=422576
Score = 75.2 bits (82), Expect = 2e-11
Identities = 72/91 (79%), Gaps = 5/91 (5%)
Strand=Plus/Plus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||| | || | ||| ||||||| | ||||||| |||||| ||||| ||||||
Sbjct 68785 AGACGTCAATCCGCTGGATAGCCAAGGTAGCTTTGG----TCGCCGTCTTCTCAGAGGGC 68840
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGC 115
|||||||||||||| |||||||| |||||||
Sbjct 68841 CTATCGGCTCAAGCTGATGGAAG-TTGAGGC 68870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947192668672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |