Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Corynespora_20cassiicola_20[genbank_20GCA_5F900169545.1_202017-03-
16] 774 sequences; 42,503,748 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq298 352 5e-95
>seq298
Length=14438
Score = 352 bits (390), Expect = 5e-95
Identities = 251/280 (90%), Gaps = 6/280 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |
Sbjct 712 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 655
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 654 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 595
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179
||||||||||| | | ||||||||| | ||||||||||||||||| | | ||||| |||
Sbjct 594 GAACGGGGTGAATACCGCCTGCACATTGGAGTCGGATACGAATAGGCCCTTGGCCCTGAA 535
Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGC-GCTCAGCTGGCGGATTG 238
||| |||||||||||||||| |||||| ||||| |||||| ||| ||| |||| ||||
Sbjct 534 CCTCAGCAGGCCGGCAACGGCAGTCCCGTGGAAG-TCGGGGCTGCT-AGCCGGCGTATTG 477
Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||| || |||||||| | |||||||||||||||||
Sbjct 476 CAATTTTACGGTGCGCAGGATTGAATCCTTTGCAGACGAC 437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819193857536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |