Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corynespora_20cassiicola_20[genbank_20GCA_5F900169545.1_202017-03- 16] 774 sequences; 42,503,748 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq298 352 5e-95 >seq298 Length=14438 Score = 352 bits (390), Expect = 5e-95 Identities = 251/280 (90%), Gaps = 6/280 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| | Sbjct 712 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 655 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 654 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 595 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179 ||||||||||| | | ||||||||| | ||||||||||||||||| | | ||||| ||| Sbjct 594 GAACGGGGTGAATACCGCCTGCACATTGGAGTCGGATACGAATAGGCCCTTGGCCCTGAA 535 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGC-GCTCAGCTGGCGGATTG 238 ||| |||||||||||||||| |||||| ||||| |||||| ||| ||| |||| |||| Sbjct 534 CCTCAGCAGGCCGGCAACGGCAGTCCCGTGGAAG-TCGGGGCTGCT-AGCCGGCGTATTG 477 Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||| || |||||||| | ||||||||||||||||| Sbjct 476 CAATTTTACGGTGCGCAGGATTGAATCCTTTGCAGACGAC 437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819193857536