Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryphonectria_20radicalis_20[genbank_20GCA_5F002179595.1_202017-06- 08] 2,318 sequences; 41,022,676 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2231 253 3e-65 >seq2231 Length=8763 Score = 253 bits (280), Expect = 3e-65 Identities = 230/283 (81%), Gaps = 15/283 (5%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| |||||||||||||||| |||| |||| |||||| Sbjct 68 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 125 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 126 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 185 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | |||| | |||| || | | |||| |||||| ||||||||||||||| || | Sbjct 186 GAACGCGATGATAC-CTCCCGCTCGTTGTAGACGGATAAGAATAGGCTTCGGCCTCGCAT 244 Query 181 CTTAGCAGGC-----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGA 235 | |||||||| | || ||||| || |||| || || | | | | ||| | Sbjct 245 CCTAGCAGGCGATCTCTCCACCGGGC-TC-----GAAGTGCACGGTGGT-AATTCGCGTA 297 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||| ||||| | || |||| || ||||||||||||||||||| Sbjct 298 TTGTAATTTAAGCACGCGCGGGATTAAATCCTTTGCAGACGAC 340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819181604352