Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq158 302 7e-80 seq128 302 7e-80 seq55 302 7e-80 >seq158 Length=12036 Score = 302 bits (334), Expect = 7e-80 Identities = 222/257 (86%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4633 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 4692 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| || || | |||||| |||||||||||| || Sbjct 4693 CCTGTTATTGCCTCAAACTTCCATCAACTTGA-GTTGATAGTCTCTCTAAGAAGCCGGCG 4751 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| ||| || ||||||||||||| |||||||||| ||||||||| |||||| Sbjct 4752 ACCAGCCAAAGCTAGCCTGGCTATTTAGCAGAGTAAGGTCTCGCTCGTTATCGCAATTAA 4811 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||| |||| |||| ||||||||||||||||||||||||||| | ||||||||| Sbjct 4812 GCAGACAAGTCACCCCACGAACTAAGAACGGCCATGCACCACCACCTGAAAAATCAAGAA 4871 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 4872 AGAGCTCTCAATCTGTC 4888 >seq128 Length=230448 Score = 302 bits (334), Expect = 7e-80 Identities = 222/257 (86%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 269 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 328 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| || || | |||||| |||||||||||| || Sbjct 329 CCTGTTATTGCCTCAAACTTCCATCAACTTGA-GTTGATAGTCTCTCTAAGAAGCCGGCG 387 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| ||| || ||||||||||||| |||||||||| ||||||||| |||||| Sbjct 388 ACCAGCCAAAGCTAGCCTGGCTATTTAGCAGAGTAAGGTCTCGCTCGTTATCGCAATTAA 447 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||| |||| |||| ||||||||||||||||||||||||||| | ||||||||| Sbjct 448 GCAGACAAGTCACCCCACGAACTAAGAACGGCCATGCACCACCACCTGAAAAATCAAGAA 507 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 508 AGAGCTCTCAATCTGTC 524 >seq55 Length=10633 Score = 302 bits (334), Expect = 7e-80 Identities = 222/257 (86%), Gaps = 1/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1004 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 945 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| || || | |||||| |||||||||||| || Sbjct 944 CCTGTTATTGCCTCAAACTTCCATCAACTTGA-GTTGATAGTCTCTCTAAGAAGCCGGCG 886 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| ||| || ||||||||||||| |||||||||| ||||||||| |||||| Sbjct 885 ACCAGCCAAAGCTAGCCTGGCTATTTAGCAGAGTAAGGTCTCGCTCGTTATCGCAATTAA 826 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||| |||| |||| ||||||||||||||||||||||||||| | ||||||||| Sbjct 825 GCAGACAAGTCACCCCACGAACTAAGAACGGCCATGCACCACCACCTGAAAAATCAAGAA 766 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 765 AGAGCTCTCAATCTGTC 749 Score = 302 bits (334), Expect = 7e-80 Identities = 222/257 (86%), Gaps = 1/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8798 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 8739 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| || || | |||||| |||||||||||| || Sbjct 8738 CCTGTTATTGCCTCAAACTTCCATCAACTTGA-GTTGATAGTCTCTCTAAGAAGCCGGCG 8680 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| ||| || ||||||||||||| |||||||||| ||||||||| |||||| Sbjct 8679 ACCAGCCAAAGCTAGCCTGGCTATTTAGCAGAGTAAGGTCTCGCTCGTTATCGCAATTAA 8620 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||| |||| |||| ||||||||||||||||||||||||||| | ||||||||| Sbjct 8619 GCAGACAAGTCACCCCACGAACTAAGAACGGCCATGCACCACCACCTGAAAAATCAAGAA 8560 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 8559 AGAGCTCTCAATCTGTC 8543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796797113094