Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq158 91.5 9e-17 seq55 91.5 9e-17 seq128 84.2 1e-14 >seq158 Length=12036 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 4439 TCCGAACGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 4495 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 4496 GTCAGGGACGTAAT-CAACGCATGCT 4520 >seq55 Length=10633 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 1198 TCCGAACGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 1142 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 1141 GTCAGGGACGTAAT-CAACGCATGCT 1117 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 8992 TCCGAACGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 8936 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 8935 GTCAGGGACGTAAT-CAACGCATGCT 8911 >seq128 Length=230448 Score = 84.2 bits (92), Expect = 1e-14 Identities = 74/86 (86%), Gaps = 5/86 (6%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| |||||||||| | ||||||||| Sbjct 76 TCCGAACGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGTG-TGTACAAAG 131 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| ||||||| ||| Sbjct 132 GTCAGGGACGTAAT-CAACGCATGCT 156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300798945320