Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq158 165 1e-38 seq128 165 1e-38 seq55 165 1e-38 >seq158 Length=12036 Score = 165 bits (182), Expect = 1e-38 Identities = 172/219 (79%), Gaps = 5/219 (2%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| || Sbjct 5272 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 5331 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 ||||| || | |||||||||||||||||||||||| |||| |||||||||||| |||| Sbjct 5332 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 5391 Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | ||| ||| |||| ||||| || || || ||| ||| | || ||| | Sbjct 5392 CAACACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 5450 Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216 ||| |||||||||||| || ||| |||| |||||| Sbjct 5451 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 5488 >seq128 Length=230448 Score = 165 bits (182), Expect = 1e-38 Identities = 172/219 (79%), Gaps = 5/219 (2%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| || Sbjct 908 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 967 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 ||||| || | |||||||||||||||||||||||| |||| |||||||||||| |||| Sbjct 968 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 1027 Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | ||| ||| |||| ||||| || || || ||| ||| | || ||| | Sbjct 1028 CAACACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 1086 Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216 ||| |||||||||||| || ||| |||| |||||| Sbjct 1087 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 1124 >seq55 Length=10633 Score = 165 bits (182), Expect = 1e-38 Identities = 172/219 (79%), Gaps = 5/219 (2%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| || Sbjct 365 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 306 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 ||||| || | |||||||||||||||||||||||| |||| |||||||||||| |||| Sbjct 305 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 246 Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | ||| ||| |||| ||||| || || || ||| ||| | || ||| | Sbjct 245 CAACACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 187 Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216 ||| |||||||||||| || ||| |||| |||||| Sbjct 186 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 149 Score = 165 bits (182), Expect = 1e-38 Identities = 172/219 (79%), Gaps = 5/219 (2%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| || Sbjct 8159 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 8100 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 ||||| || | |||||||||||||||||||||||| |||| |||||||||||| |||| Sbjct 8099 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 8040 Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | ||| ||| |||| ||||| || || || ||| ||| | || ||| | Sbjct 8039 CAACACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 7981 Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216 ||| |||||||||||| || ||| |||| |||||| Sbjct 7980 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 7943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595197843516