Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq158 165 1e-38
seq128 165 1e-38
seq55 165 1e-38
>seq158
Length=12036
Score = 165 bits (182), Expect = 1e-38
Identities = 172/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 5272 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 5331
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 5332 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 5391
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| ||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 5392 CAACACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 5450
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 5451 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 5488
>seq128
Length=230448
Score = 165 bits (182), Expect = 1e-38
Identities = 172/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 908 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 967
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 968 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 1027
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| ||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 1028 CAACACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 1086
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 1087 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 1124
>seq55
Length=10633
Score = 165 bits (182), Expect = 1e-38
Identities = 172/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Minus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 365 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 306
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 305 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 246
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| ||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 245 CAACACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 187
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 186 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 149
Score = 165 bits (182), Expect = 1e-38
Identities = 172/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Minus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||
Sbjct 8159 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 8100
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
||||| || | |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct 8099 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 8040
Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| ||| ||| |||| ||||| || || || ||| ||| | || ||| |
Sbjct 8039 CAACACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 7981
Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
||| |||||||||||| || ||| |||| ||||||
Sbjct 7980 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 7943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595197843516
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |