Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq158 239 5e-61
seq128 239 5e-61
seq55 239 5e-61
>seq158
Length=12036
Score = 239 bits (264), Expect = 5e-61
Identities = 167/189 (88%), Gaps = 1/189 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 5390 GGAATCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 5331
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
| ||| |||||||||||| |||||| |||||| ||||||||||| ||||||||| ||
Sbjct 5330 CGTTAGCATGGAATAATAAAATAGGGCGTGCGTTTCTATTTTGTTGGTTTCTAGAGACG- 5272
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||| |||||| || | | | ||||||||| |||||||||| |||||| |||||||||||
Sbjct 5271 CCGCAATGATTAACAGGAACAGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTC 5212
Query 181 TTGGATTTA 189
|||||||||
Sbjct 5211 TTGGATTTA 5203
>seq128
Length=230448
Score = 239 bits (264), Expect = 5e-61
Identities = 167/189 (88%), Gaps = 1/189 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1026 GGAATCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 967
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
| ||| |||||||||||| |||||| |||||| ||||||||||| ||||||||| ||
Sbjct 966 CGTTAGCATGGAATAATAAAATAGGGCGTGCGTTTCTATTTTGTTGGTTTCTAGAGACG- 908
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||| |||||| || | | | ||||||||| |||||||||| |||||| |||||||||||
Sbjct 907 CCGCAATGATTAACAGGAACAGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTC 848
Query 181 TTGGATTTA 189
|||||||||
Sbjct 847 TTGGATTTA 839
>seq55
Length=10633
Score = 239 bits (264), Expect = 5e-61
Identities = 167/189 (88%), Gaps = 1/189 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 247 GGAATCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 306
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
| ||| |||||||||||| |||||| |||||| ||||||||||| ||||||||| ||
Sbjct 307 CGTTAGCATGGAATAATAAAATAGGGCGTGCGTTTCTATTTTGTTGGTTTCTAGAGACG- 365
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||| |||||| || | | | ||||||||| |||||||||| |||||| |||||||||||
Sbjct 366 CCGCAATGATTAACAGGAACAGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTC 425
Query 181 TTGGATTTA 189
|||||||||
Sbjct 426 TTGGATTTA 434
Score = 239 bits (264), Expect = 5e-61
Identities = 167/189 (88%), Gaps = 1/189 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 8041 GGAATCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 8100
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
| ||| |||||||||||| |||||| |||||| ||||||||||| ||||||||| ||
Sbjct 8101 CGTTAGCATGGAATAATAAAATAGGGCGTGCGTTTCTATTTTGTTGGTTTCTAGAGACG- 8159
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||| |||||| || | | | ||||||||| |||||||||| |||||| |||||||||||
Sbjct 8160 CCGCAATGATTAACAGGAACAGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTC 8219
Query 181 TTGGATTTA 189
|||||||||
Sbjct 8220 TTGGATTTA 8228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511998144960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |