Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq158 307 2e-81
seq55 307 2e-81
>seq158
Length=12036
Score = 307 bits (340), Expect = 2e-81
Identities = 239/279 (86%), Gaps = 8/279 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |
Sbjct 849 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 792
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 791 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 732
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC-GGCCCCGAA 179
||||||||||||| | ||||||| |||||||||||||||||| || ||||| |||
Sbjct 731 GAACGGGGTGATTTCCGCCTGCAC----CAGTCGGATACGAATAGGCCTCTGGCCCAGAA 676
Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
||||| |||||||||| || ||| | |||| ||| |||| || |||| |||||
Sbjct 675 CCTTACCAGGCCGGCATGGGCAGTCTCATTGAAGTTGGGGCTGCTC-GCCGGCGTATTGC 617
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||| || |||||||| | |||||||||||||||||
Sbjct 616 AATTGTACAGTGCGCAGGATTGAATCCTTTGCAGACGAC 578
Score = 307 bits (340), Expect = 2e-81
Identities = 239/279 (86%), Gaps = 8/279 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |
Sbjct 8643 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 8586
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 8585 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 8526
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC-GGCCCCGAA 179
||||||||||||| | ||||||| |||||||||||||||||| || ||||| |||
Sbjct 8525 GAACGGGGTGATTTCCGCCTGCAC----CAGTCGGATACGAATAGGCCTCTGGCCCAGAA 8470
Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
||||| |||||||||| || ||| | |||| ||| |||| || |||| |||||
Sbjct 8469 CCTTACCAGGCCGGCATGGGCAGTCTCATTGAAGTTGGGGCTGCTC-GCCGGCGTATTGC 8411
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||| || |||||||| | |||||||||||||||||
Sbjct 8410 AATTGTACAGTGCGCAGGATTGAATCCTTTGCAGACGAC 8372
>seq55
Length=10633
Score = 307 bits (340), Expect = 2e-81
Identities = 239/279 (86%), Gaps = 8/279 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |
Sbjct 4788 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 4845
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 4846 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 4905
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC-GGCCCCGAA 179
||||||||||||| | ||||||| |||||||||||||||||| || ||||| |||
Sbjct 4906 GAACGGGGTGATTTCCGCCTGCAC----CAGTCGGATACGAATAGGCCTCTGGCCCAGAA 4961
Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
||||| |||||||||| || ||| | |||| ||| |||| || |||| |||||
Sbjct 4962 CCTTACCAGGCCGGCATGGGCAGTCTCATTGAAGTTGGGGCTGCTC-GCCGGCGTATTGC 5020
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||| || |||||||| | |||||||||||||||||
Sbjct 5021 AATTGTACAGTGCGCAGGATTGAATCCTTTGCAGACGAC 5059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819197031936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |