Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq158 307 2e-81 seq55 307 2e-81 >seq158 Length=12036 Score = 307 bits (340), Expect = 2e-81 Identities = 239/279 (86%), Gaps = 8/279 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| | Sbjct 849 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 792 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 791 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 732 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC-GGCCCCGAA 179 ||||||||||||| | ||||||| |||||||||||||||||| || ||||| ||| Sbjct 731 GAACGGGGTGATTTCCGCCTGCAC----CAGTCGGATACGAATAGGCCTCTGGCCCAGAA 676 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 ||||| |||||||||| || ||| | |||| ||| |||| || |||| ||||| Sbjct 675 CCTTACCAGGCCGGCATGGGCAGTCTCATTGAAGTTGGGGCTGCTC-GCCGGCGTATTGC 617 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| || |||||||| | ||||||||||||||||| Sbjct 616 AATTGTACAGTGCGCAGGATTGAATCCTTTGCAGACGAC 578 Score = 307 bits (340), Expect = 2e-81 Identities = 239/279 (86%), Gaps = 8/279 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| | Sbjct 8643 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 8586 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 8585 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 8526 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC-GGCCCCGAA 179 ||||||||||||| | ||||||| |||||||||||||||||| || ||||| ||| Sbjct 8525 GAACGGGGTGATTTCCGCCTGCAC----CAGTCGGATACGAATAGGCCTCTGGCCCAGAA 8470 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 ||||| |||||||||| || ||| | |||| ||| |||| || |||| ||||| Sbjct 8469 CCTTACCAGGCCGGCATGGGCAGTCTCATTGAAGTTGGGGCTGCTC-GCCGGCGTATTGC 8411 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| || |||||||| | ||||||||||||||||| Sbjct 8410 AATTGTACAGTGCGCAGGATTGAATCCTTTGCAGACGAC 8372 >seq55 Length=10633 Score = 307 bits (340), Expect = 2e-81 Identities = 239/279 (86%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| | Sbjct 4788 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 4845 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 4846 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 4905 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC-GGCCCCGAA 179 ||||||||||||| | ||||||| |||||||||||||||||| || ||||| ||| Sbjct 4906 GAACGGGGTGATTTCCGCCTGCAC----CAGTCGGATACGAATAGGCCTCTGGCCCAGAA 4961 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 ||||| |||||||||| || ||| | |||| ||| |||| || |||| ||||| Sbjct 4962 CCTTACCAGGCCGGCATGGGCAGTCTCATTGAAGTTGGGGCTGCTC-GCCGGCGTATTGC 5020 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| || |||||||| | ||||||||||||||||| Sbjct 5021 AATTGTACAGTGCGCAGGATTGAATCCTTTGCAGACGAC 5059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819197031936