Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq109 95.1 5e-14 seq331 86.0 2e-11 >seq109 Length=223701 Score = 95.1 bits (104), Expect = 5e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||||| | ||||||||||||||| || || || || | Sbjct 192996 CAATTGTCATACGAGACGGAATGGCGTGAGGGTTGATGATGAGATCTGGTGTCACACCTT 192937 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 | ||| || ||||||||||| | | | | | |||||| || || ||||| | | Sbjct 192936 CCCTGGTGAAAGGCATATCTTCCTGTCGGTAGGTAATACCAATCGTACCTTTTTGACCGT 192877 Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569 ||||||||||||||||| ||||| Sbjct 192876 GACGAGAAGCAAACTTGTCACCAAT 192852 >seq331 Length=146099 Score = 86.0 bits (94), Expect = 2e-11 Identities = 210/316 (66%), Gaps = 2/316 (1%) Strand=Plus/Plus Query 12731 AGAACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAA 12790 || |||||||| ||| || | |||||| | ||||||| || ||| | ||| || Sbjct 59708 AGGACATCGTAGTAGATGACATCCATGCCCATGGACTCTGCCAGCACACTCAGCTGCGAG 59767 Query 12791 CCAATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACC-TTG 12849 ||||||| || || || || ||||| || || || || | || || | |||||| ||| Sbjct 59768 CCAATGTGTCCGTATCCGACAATACCAAGTGTTTTGCCACGAATCTCCCAGCAACCCTTG 59827 Query 12850 AGAAGTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGA 12909 | |||||||||| | || | ||| || || || | || ||| |||||||| Sbjct 59828 CTGAC-CTTGTTCCAAGTACCGTTGTGAAGCTCCATGGAGCGGTCCGCAAGCTGACGAGC 59886 Query 12910 AAGATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGA 12969 || ||| | || | |||| ||| || ||||| | | |||| |||||| || Sbjct 59887 GAGCGCAATGATTTCTGAGATGACGAGTTCAGCCACAGAGCGCGAATTGCTAAAGGGCGA 59946 Query 12970 ATTAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAAT 13029 || ||||| || || || | |||| ||| | | || | ||||| | | || || Sbjct 59947 GTTGAAGACGGCGATACCACGATTGGCAGCAGTCTGAAGGTCGACCTGGTTGGTGCCGAT 60006 Query 13030 GCAGAAGCATCCTATG 13045 ||||||||| || ||| Sbjct 60007 GCAGAAGCAGCCGATG 60022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884877367859982