Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq64 434 2e-119
seq87 286 6e-75
>seq64
Length=50038
Score = 434 bits (480), Expect = 2e-119
Identities = 284/312 (91%), Gaps = 1/312 (0%)
Strand=Plus/Minus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGC 66
||||||||||||||| ||||||| || || |||||||||||||||| ||| |||||
Sbjct 5872 GTCCGGCCGGGCCTT-CCTTCTGAAGAACCTCATGCCCTTCACTGGGCGTGTTGGGGAAT 5814
Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 5813 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACGTTA 5754
Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186
||||||||||||| |||||| |||||| ||||||||||||||||||||| ||||| ||
Sbjct 5753 GCATGGAATAATAAAATAGGGCGTGCGTTTCTATTTTGTTGGTTTCTAGAGACGCCGCAA 5694
Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246
||||||| ||| | ||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 5693 TGATTAACAGGAACAGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGAT 5634
Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306
||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 5633 TTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGAAC 5574
Query 307 GAAAGTTAGGGG 318
||||||||||||
Sbjct 5573 GAAAGTTAGGGG 5562
>seq87
Length=8822
Score = 286 bits (316), Expect = 6e-75
Identities = 219/257 (85%), Gaps = 2/257 (1%)
Strand=Plus/Minus
Query 62 GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG-CTCGAAT 120
||| |||||||| ||||||||||||||||||||||||||||||||||| | | | |||||
Sbjct 1111 GGAACCAGGACTATTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCATAGGCCCGAAT 1052
Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180
| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| || |
Sbjct 1051 ATATTAGCATGGAATAACAGAATAGGACGAGCGGTTCTATTTTGTTGGTTTCTAGAACTG 992
Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240
||||||||||||| ||||| || |||||| | |||||| | |||||||||||||
Sbjct 991 CCGTAATGATTAACAGGGACAGCCGGGGGCATTAGTATTTGCACGCTAGAGGTGAAATTC 932
Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300
||||||| |||||| ||||||||||||| || ||||| ||||||||||||||||
Sbjct 931 TTGGATTGTGCAAAGACTTCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA 872
Query 301 GTGAACGAAAGTTAGGG 317
||||||| |||||||
Sbjct 871 -AGAACGAAGGTTAGGG 856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915198755328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |