Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq64 302 7e-80 seq87 293 4e-77 >seq64 Length=50038 Score = 302 bits (334), Expect = 7e-80 Identities = 222/257 (86%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5061 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 5120 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| || || | |||||| |||||||||||| || Sbjct 5121 CCTGTTATTGCCTCAAACTTCCATCAACTTGA-GTTGATAGTCTCTCTAAGAAGCCGGCG 5179 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| ||| || ||||||||||||| |||||||||| ||||||||| |||||| Sbjct 5180 ACCAGCCAAAGCTAGCCTGGCTATTTAGCAGAGTAAGGTCTCGCTCGTTATCGCAATTAA 5239 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||| |||| |||| ||||||||||||||||||||||||||| | ||||||||| Sbjct 5240 GCAGACAAGTCACCCCACGAACTAAGAACGGCCATGCACCACCACCTGAAAAATCAAGAA 5299 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 5300 AGAGCTCTCAATCTGTC 5316 >seq87 Length=8822 Score = 293 bits (324), Expect = 4e-77 Identities = 224/262 (85%), Gaps = 5/262 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || ||| ||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 347 ACTCGTTGTCTCTGTCAGTGTAGCGCGCGTGCAGCCCGGAACATCTAAGGGCATCACAGA 406 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC-CAATAGTCCCTCTAAGAAGCCA-- 118 ||||||||||||| | ||||| || | | | ||||||||||||||||| || Sbjct 407 CCTGTTATTGCCTTTTGCCTCCATCACCTAAACGGTCGATAGTCCCTCTAAGAAGACATA 466 Query 119 -GCCACCAACCATA-GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 | ||||| | | ||| | | ||||||||||||| ||||||||||||||||||||| Sbjct 467 AGGGGCCAACAAAATGTCAACCCGTCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGGA 526 Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 527 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 586 Query 237 AAGAAAGAGCTATCAATCTGTC 258 | ||||| || ||||||||||| Sbjct 587 ATGAAAGCGCCATCAATCTGTC 608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798950216