Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq64 165 1e-38 seq87 152 6e-35 >seq64 Length=50038 Score = 165 bits (182), Expect = 1e-38 Identities = 172/219 (79%), Gaps = 5/219 (2%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| || Sbjct 5700 CGTCTCTAGAAACCAACAAAATAGAAACGCACGCCCTATTTTATTATTCCATGCTAACGT 5759 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 ||||| || | |||||||||||||||||||||||| |||| |||||||||||| |||| Sbjct 5760 ATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCC 5819 Query 121 CCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | ||| ||| |||| ||||| || || || ||| ||| | || ||| | Sbjct 5820 CAACACGCCCAGTGAAGGGCAT-GAGGTTCTTCAGAAGGAAGGCCCGGCCGGACGAGTGC 5878 Query 179 TCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216 ||| |||||||||||| || ||| |||| |||||| Sbjct 5879 ACGCGGTGAGGCGGACC-CGCCAGCCAGGCCCAAGTTTC 5916 >seq87 Length=8822 Score = 152 bits (168), Expect = 6e-35 Identities = 104/116 (90%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 |||||||||||||||||||| ||| ||||||||||| ||||||||||||||| ||||| Sbjct 996 TCTAGAAACCAACAAAATAGAACCGCTCGTCCTATTCTGTTATTCCATGCTAATATATTC 1055 Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 |||| || |||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct 1056 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATAGTCCTGGTTCC 1111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199215824