Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1919 753 0.0 >seq1919 Length=13974 Score = 753 bits (834), Expect = 0.0 Identities = 566/657 (86%), Gaps = 6/657 (1%) Strand=Plus/Minus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct 4367 AGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAATTTCTT 4308 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4307 CTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 4248 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 ||||||||| |||||| |||||| |||||||||||||||||||||||||||| |||| || Sbjct 4247 AGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATTGTTGAAAGGGAAGCGTTTGCGAC 4188 Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCC-CTCGGCCGGTGCACTCTTCTGCGGTCAGG 266 ||||||| | | | ||| ||||| |||| ||||||||||| | | | ||| Sbjct 4187 CAGACTTTTTCCAGGCGGATCATCCGGCGTTCTCG-CCGGTGCACTCCGCCTGGTTGAGG 4129 Query 267 CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326 |||||||| | | | ||||||||||| ||||| || || || |||||| | || Sbjct 4128 CCAGCATCGGTTTCCTTAGGGGGATAAAGGCCTGGGGAACGTAGCTCC-TTCGGGAG-TG 4071 Query 327 TTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGC 386 ||||||||| || | ||| | | || |||| |||| ||||||| | | ||||||| Sbjct 4070 TTATAGCCCCTGGCGTAATACCCCTCGGG-GGACCGAGGAACGCGCTCTG-CAAGGATGC 4013 Query 387 TGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATG 446 |||||||||||| || | || ||||||||| |||||||||||||||||| ||||| | || Sbjct 4012 TGGCGTAATGGTCGTCAACGACCCGTCTTGAAACACGGACCAAGGAGTCGAACATTTGTG 3953 Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506 |||||||||||||||||||||| ||||||||||||||||||||||||| || ||| | Sbjct 3952 CGAGTGTTTGGGTGTCAAACCCTCACGCGTAATGAAAGTGAACGGAGGTGAGAGCCCTTA 3893 Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566 ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 3892 CGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAACTGT 3833 Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 | ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 3832 TCGGACCCGAAAGATGGTGAACTATGCGTGGATAGGGTGAAGCCAGAGGAAACTCTGGTG 3773 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||| ||||||||||||||||||||| || | || ||||||| Sbjct 3772 GAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATCTGCGCATGGGGGCGA 3716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079958301200