Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq870 100 7e-19 >seq870 Length=169842 Score = 100 bits (110), Expect = 7e-19 Identities = 187/270 (69%), Gaps = 16/270 (6%) Strand=Plus/Minus Query 20 CACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCAT 79 ||| || || ||||||||||||||| | |||||||| |||||||| ||| Sbjct 154033 CACTGCTATGCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTACATCAT 153974 Query 80 TCGTGCAG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTA 138 || |||| | | | | ||| | | ||||| ||| ||||||||||||||| | | |||| Sbjct 153973 TCATGCAAAGACTGCATTTAACAGTCAAGGTATTCCGCTACCTTAGGACCCTCA-CGTTA 153915 Query 139 CGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC-------TTCGCGTTAGCTAACCCCAT 191 ||||||| || ||||||| ||| || | | || ||||| || | Sbjct 153914 AGGCCGCCATTAACCGGGGGTTCCTACAGTACCAAACCTTTTAAAGTTAGTTA----TTT 153859 Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTT-CGTGTT--T 248 ||| || |||||||||||||| |||||| |||||| | ||||| || || | Sbjct 153858 TCGTTAGCCAGCCGGCACCGGGCAGAAATCACACTCTATACTTAGACTTTAAGTCTTTAT 153799 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 ||| |||||| |||||| | |||||||||| Sbjct 153798 GCAAAGTGCTTTGTTTTAATTAAACAGTCG 153769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260775490048