Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1919 253 3e-65 seq948 91.5 2e-16 seq1454 80.6 4e-13 >seq1919 Length=13974 Score = 253 bits (280), Expect = 3e-65 Identities = 178/199 (89%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| ||| || || |||||||||||||||||||||| Sbjct 5839 ACCTGTTATTGCCTCAAACTTCCATCCGCTTGA-GCGGATAGTCCCTCTAAGAAGCCAGC 5897 Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | ||| || | || |||||||||||||||||||||||||||||||||||| |||| Sbjct 5898 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 5956 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 5957 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 6016 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 6017 AAAGAGCTCTCAATCTGTC 6035 Score = 95.1 bits (104), Expect = 2e-17 Identities = 57/60 (95%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 5409 TACTCGCTGGCTCTGTCAGTGTAACGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 5468 >seq948 Length=44760 Score = 91.5 bits (100), Expect = 2e-16 Identities = 53/55 (96%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 13983 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 14037 >seq1454 Length=123121 Score = 80.6 bits (88), Expect = 4e-13 Identities = 74/92 (80%), Gaps = 4/92 (4%) Strand=Plus/Minus Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 ||||| ||| ||||||||| ||||||||||||| | || |||||||||||| | |||| Sbjct 43621 ATTAAGCAGT-AAATCACTCTACCAACTAAGAACAACTATACACCACCACCCACAAAATC 43563 Query 237 ---AAGAAAGAGCTATCAATCTGTCCTCCCTC 265 ||||||||||| ||||| || | ||||| Sbjct 43562 AAGAAGAAAGAGCTCTCAATTTGACAACCCTC 43531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796784994264