Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq1919 372 1e-100
>seq1919
Length=13974
Score = 372 bits (412), Expect = 1e-100
Identities = 258/291 (89%), Gaps = 5/291 (2%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1170 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 1229
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 1230 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 1289
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||| |||||| ||| || ||| |||| ||||||||||||
Sbjct 1290 GGCCCGCGAAGGACCTTAATACCAGAAGTTGGACG--AAAGTCCAGCCCCGCTTCATTGA 1347
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| ||
Sbjct 1348 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 1404
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
||||||||||| | ||| |||||||| ||| ||||||||||||||||||
Sbjct 1405 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAAC 1455
Score = 257 bits (284), Expect = 5e-66
Identities = 144/145 (99%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1797 CAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 1856
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1857 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 1916
Query 417 ACGAGGCATTTGGCTACCTTAAGAG 441
|||||||||||||||||||||||||
Sbjct 1917 ACGAGGCATTTGGCTACCTTAAGAG 1941
Score = 172 bits (190), Expect = 2e-40
Identities = 100/103 (97%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500
|||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||
Sbjct 2382 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTAAATCTCTTTACTTTGACATTC 2441
Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 2442 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 2484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635168211712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |