Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1919 251 1e-64 >seq1919 Length=13974 Score = 251 bits (278), Expect = 1e-64 Identities = 229/280 (82%), Gaps = 8/280 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 13936 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 13879 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 13878 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 13819 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| |||||| | |||| ||| | |||| |||||||||||||||| ||||| || | Sbjct 13818 GAACGCGGTGATAC-CTCCCACACGTTGTAGACGGATACGAATAGGCTCCGGCCTCGCAT 13760 Query 181 CTTAGCAGGC-CGGCAACGGGCGTCCCGCGGAAGC-GCGGGGCGCTCAGCTGGCGGATTG 238 |||||| ||| | | ||| | ||||||| | || | | | | ||| |||| Sbjct 13759 CTTAGCTGGCGATTCTTCCATCGTGC--CGGAAGCGGTACGGTGGT-ATTTCGCGTATTG 13703 Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| | || ||| || ||||||||||||||||||| Sbjct 13702 TAATTTTAACACGCGTGGGATTAAATCCTTTGCAGACGAC 13663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819184572416