Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq1919 251 1e-64
>seq1919
Length=13974
Score = 251 bits (278), Expect = 1e-64
Identities = 229/280 (82%), Gaps = 8/280 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 13936 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 13879
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 13878 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 13819
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| |||||| | |||| ||| | |||| |||||||||||||||| ||||| || |
Sbjct 13818 GAACGCGGTGATAC-CTCCCACACGTTGTAGACGGATACGAATAGGCTCCGGCCTCGCAT 13760
Query 181 CTTAGCAGGC-CGGCAACGGGCGTCCCGCGGAAGC-GCGGGGCGCTCAGCTGGCGGATTG 238
|||||| ||| | | ||| | ||||||| | || | | | | ||| ||||
Sbjct 13759 CTTAGCTGGCGATTCTTCCATCGTGC--CGGAAGCGGTACGGTGGT-ATTTCGCGTATTG 13703
Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| | || ||| || |||||||||||||||||||
Sbjct 13702 TAATTTTAACACGCGTGGGATTAAATCCTTTGCAGACGAC 13663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819184572416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |